Gene : Seita.7G006300 S. italica v2.2
Genomic Order:  63 Name:  ? Seita.7G006300
Secondary Identifier:  ? PAC:32702400
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Seita.7G006300 0.5kb upstream 0.5kb upstream 1215 true scaffold_7: 1139347-1140561 Setaria italica
Seita.7G006300 0.5kb upstream 0.5kb upstream 500 false scaffold_7: 1139347-1139846 Setaria italica
Seita.7G006300 0.5kb downstream 0.5kb downstream 1215 true scaffold_7: 1139847-1141061 Setaria italica
Seita.7G006300 0.5kb downstream 0.5kb downstream 500 false scaffold_7: 1140562-1141061 Setaria italica
Seita.7G006300 1.0kb upstream 1.0kb upstream 1715 true scaffold_7: 1138847-1140561 Setaria italica
Seita.7G006300 1.0kb upstream 1.0kb upstream 1000 false scaffold_7: 1138847-1139846 Setaria italica
Seita.7G006300 1.0kb downstream 1.0kb downstream 1715 true scaffold_7: 1139847-1141561 Setaria italica
Seita.7G006300 1.0kb downstream 1.0kb downstream 1000 false scaffold_7: 1140562-1141561 Setaria italica
Seita.7G006300 2.0kb upstream 2.0kb upstream 2715 true scaffold_7: 1137847-1140561 Setaria italica
Seita.7G006300 2.0kb upstream 2.0kb upstream 2000 false scaffold_7: 1137847-1139846 Setaria italica
Seita.7G006300 2.0kb downstream 2.0kb downstream 2715 true scaffold_7: 1139847-1142561 Setaria italica
Seita.7G006300 2.0kb downstream 2.0kb downstream 2000 false scaffold_7: 1140562-1142561 Setaria italica
Seita.7G006300 5.0kb upstream 5.0kb upstream 5715 true scaffold_7: 1134847-1140561 Setaria italica
Seita.7G006300 5.0kb upstream 5.0kb upstream 5000 false scaffold_7: 1134847-1139846 Setaria italica
Seita.7G006300 5.0kb downstream 5.0kb downstream 5715 true scaffold_7: 1139847-1145561 Setaria italica
Seita.7G006300 5.0kb downstream 5.0kb downstream 5000 false scaffold_7: 1140562-1145561 Setaria italica
Seita.7G006300 10.0kb upstream 10.0kb upstream 10715 true scaffold_7: 1129847-1140561 Setaria italica
Seita.7G006300 10.0kb upstream 10.0kb upstream 10000 false scaffold_7: 1129847-1139846 Setaria italica
Seita.7G006300 10.0kb downstream 10.0kb downstream 10715 true scaffold_7: 1139847-1150561 Setaria italica
Seita.7G006300 10.0kb downstream 10.0kb downstream 10000 false scaffold_7: 1140562-1150561 Setaria italica

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122180782 5267 Panicoideae View MSA
124569748 5269 Grass View MSA
122046165 5273 Angiosperm View MSA
121310567 5274 Embryophyte View MSA
123348018 5275 Viridiplantae View MSA

20 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 16.289     High  
cufflinks 8.458        
cufflinks 0.104       Low
cufflinks 0.425       Low
cufflinks 1.153        
cufflinks 9.864        
cufflinks 11.346        
cufflinks 13.888     High  
cufflinks 15.005     High  
cufflinks 41.917     High High
cufflinks 10.034        
cufflinks 4.656        
cufflinks 18.774     High  
cufflinks 0.288       Low
cufflinks 14.511     High  
cufflinks 3.407        
cufflinks 6.689        
cufflinks 1.476        
cufflinks 0.383       Low
cufflinks 10.996        

0 Strain