Gene : Seita.7G031100 S. italica v2.2
Defline:  (1 of 1) PTHR11937:SF13 - ACTIN-RELATED PROTEIN 8 Genomic Order:  311
Name:  ? Seita.7G031100 Secondary Identifier:  ? PAC:32704047
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Seita.7G031100 0.5kb upstream 0.5kb upstream 18665 true scaffold_7: 9435722-9454386 Setaria italica
Seita.7G031100 0.5kb upstream 0.5kb upstream 500 false scaffold_7: 9453887-9454386 Setaria italica
Seita.7G031100 0.5kb downstream 0.5kb downstream 18665 true scaffold_7: 9435222-9453886 Setaria italica
Seita.7G031100 0.5kb downstream 0.5kb downstream 500 false scaffold_7: 9435222-9435721 Setaria italica
Seita.7G031100 1.0kb upstream 1.0kb upstream 19165 true scaffold_7: 9435722-9454886 Setaria italica
Seita.7G031100 1.0kb upstream 1.0kb upstream 1000 false scaffold_7: 9453887-9454886 Setaria italica
Seita.7G031100 1.0kb downstream 1.0kb downstream 19165 true scaffold_7: 9434722-9453886 Setaria italica
Seita.7G031100 1.0kb downstream 1.0kb downstream 1000 false scaffold_7: 9434722-9435721 Setaria italica
Seita.7G031100 2.0kb upstream 2.0kb upstream 20165 true scaffold_7: 9435722-9455886 Setaria italica
Seita.7G031100 2.0kb upstream 2.0kb upstream 2000 false scaffold_7: 9453887-9455886 Setaria italica
Seita.7G031100 2.0kb downstream 2.0kb downstream 20165 true scaffold_7: 9433722-9453886 Setaria italica
Seita.7G031100 2.0kb downstream 2.0kb downstream 2000 false scaffold_7: 9433722-9435721 Setaria italica
Seita.7G031100 5.0kb upstream 5.0kb upstream 23165 true scaffold_7: 9435722-9458886 Setaria italica
Seita.7G031100 5.0kb upstream 5.0kb upstream 5000 false scaffold_7: 9453887-9458886 Setaria italica
Seita.7G031100 5.0kb downstream 5.0kb downstream 23165 true scaffold_7: 9430722-9453886 Setaria italica
Seita.7G031100 5.0kb downstream 5.0kb downstream 5000 false scaffold_7: 9430722-9435721 Setaria italica
Seita.7G031100 10.0kb upstream 10.0kb upstream 28165 true scaffold_7: 9435722-9463886 Setaria italica
Seita.7G031100 10.0kb upstream 10.0kb upstream 10000 false scaffold_7: 9453887-9463886 Setaria italica
Seita.7G031100 10.0kb downstream 10.0kb downstream 28165 true scaffold_7: 9425722-9453886 Setaria italica
Seita.7G031100 10.0kb downstream 10.0kb downstream 10000 false scaffold_7: 9425722-9435721 Setaria italica

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122178798 5267 Panicoideae View MSA
124585435 5269 Grass View MSA
122046420 5273 Angiosperm View MSA
121345256 5274 Embryophyte View MSA
123380181 5275 Viridiplantae View MSA

20 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.635       High
cufflinks 0.587        
cufflinks 0.46        
cufflinks 0.46        
cufflinks 0.375       Low
cufflinks 0.559        
cufflinks 0.459        
cufflinks 0.425        
cufflinks 0.405        
cufflinks 0.38       Low
cufflinks 0.487        
cufflinks 0.468        
cufflinks 0.477        
cufflinks 0.415        
cufflinks 0.476        
cufflinks 0.691       High
cufflinks 0.479        
cufflinks 0.894       High
cufflinks 0.316       Low
cufflinks 0.439        

0 Strain