Gene : Seita.6G235000 S. italica v2.2
Defline:  (1 of 1) 1.1.1.14 - L-iditol 2-dehydrogenase / Sorbitol dehydrogenase Genomic Order:  2350
Name:  ? Seita.6G235000 Secondary Identifier:  ? PAC:32700292
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Seita.6G235000 0.5kb upstream 0.5kb upstream 3183 true scaffold_6: 34691369-34694551 Setaria italica
Seita.6G235000 0.5kb upstream 0.5kb upstream 500 false scaffold_6: 34691369-34691868 Setaria italica
Seita.6G235000 0.5kb downstream 0.5kb downstream 3183 true scaffold_6: 34691869-34695051 Setaria italica
Seita.6G235000 0.5kb downstream 0.5kb downstream 500 false scaffold_6: 34694552-34695051 Setaria italica
Seita.6G235000 1.0kb upstream 1.0kb upstream 3683 true scaffold_6: 34690869-34694551 Setaria italica
Seita.6G235000 1.0kb upstream 1.0kb upstream 1000 false scaffold_6: 34690869-34691868 Setaria italica
Seita.6G235000 1.0kb downstream 1.0kb downstream 3683 true scaffold_6: 34691869-34695551 Setaria italica
Seita.6G235000 1.0kb downstream 1.0kb downstream 1000 false scaffold_6: 34694552-34695551 Setaria italica
Seita.6G235000 2.0kb upstream 2.0kb upstream 4683 true scaffold_6: 34689869-34694551 Setaria italica
Seita.6G235000 2.0kb upstream 2.0kb upstream 2000 false scaffold_6: 34689869-34691868 Setaria italica
Seita.6G235000 2.0kb downstream 2.0kb downstream 4683 true scaffold_6: 34691869-34696551 Setaria italica
Seita.6G235000 2.0kb downstream 2.0kb downstream 2000 false scaffold_6: 34694552-34696551 Setaria italica
Seita.6G235000 5.0kb upstream 5.0kb upstream 7683 true scaffold_6: 34686869-34694551 Setaria italica
Seita.6G235000 5.0kb upstream 5.0kb upstream 5000 false scaffold_6: 34686869-34691868 Setaria italica
Seita.6G235000 5.0kb downstream 5.0kb downstream 7683 true scaffold_6: 34691869-34699551 Setaria italica
Seita.6G235000 5.0kb downstream 5.0kb downstream 5000 false scaffold_6: 34694552-34699551 Setaria italica
Seita.6G235000 10.0kb upstream 10.0kb upstream 12683 true scaffold_6: 34681869-34694551 Setaria italica
Seita.6G235000 10.0kb upstream 10.0kb upstream 10000 false scaffold_6: 34681869-34691868 Setaria italica
Seita.6G235000 10.0kb downstream 10.0kb downstream 12683 true scaffold_6: 34691869-34704551 Setaria italica
Seita.6G235000 10.0kb downstream 10.0kb downstream 10000 false scaffold_6: 34694552-34704551 Setaria italica

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122175540 5267 Panicoideae View MSA
124578811 5269 Grass View MSA
122049435 5273 Angiosperm View MSA
121345697 5274 Embryophyte View MSA
123428625 5275 Viridiplantae View MSA

20 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.887        
cufflinks 1.049       Low
cufflinks 20.558     High High
cufflinks 25.239     High High
cufflinks 17.82     High High
cufflinks 1.898        
cufflinks 3.677        
cufflinks 7.838        
cufflinks 5.797        
cufflinks 5.563        
cufflinks 2.827        
cufflinks 1.085       Low
cufflinks 5.019        
cufflinks 23.401     High High
cufflinks 1.677        
cufflinks 6.254        
cufflinks 1.621        
cufflinks 3.066        
cufflinks 12.103     High  
cufflinks 1.763        

0 Strain