Gene : Seita.6G250300 S. italica v2.2
Genomic Order:  2503 Name:  ? Seita.6G250300
Secondary Identifier:  ? PAC:32701320
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Seita.6G250300 0.5kb upstream 0.5kb upstream 3250 true scaffold_6: 35663005-35666254 Setaria italica
Seita.6G250300 0.5kb upstream 0.5kb upstream 500 false scaffold_6: 35665755-35666254 Setaria italica
Seita.6G250300 0.5kb downstream 0.5kb downstream 3250 true scaffold_6: 35662505-35665754 Setaria italica
Seita.6G250300 0.5kb downstream 0.5kb downstream 500 false scaffold_6: 35662505-35663004 Setaria italica
Seita.6G250300 1.0kb upstream 1.0kb upstream 3750 true scaffold_6: 35663005-35666754 Setaria italica
Seita.6G250300 1.0kb upstream 1.0kb upstream 1000 false scaffold_6: 35665755-35666754 Setaria italica
Seita.6G250300 1.0kb downstream 1.0kb downstream 3750 true scaffold_6: 35662005-35665754 Setaria italica
Seita.6G250300 1.0kb downstream 1.0kb downstream 1000 false scaffold_6: 35662005-35663004 Setaria italica
Seita.6G250300 2.0kb upstream 2.0kb upstream 4750 true scaffold_6: 35663005-35667754 Setaria italica
Seita.6G250300 2.0kb upstream 2.0kb upstream 2000 false scaffold_6: 35665755-35667754 Setaria italica
Seita.6G250300 2.0kb downstream 2.0kb downstream 4750 true scaffold_6: 35661005-35665754 Setaria italica
Seita.6G250300 2.0kb downstream 2.0kb downstream 2000 false scaffold_6: 35661005-35663004 Setaria italica
Seita.6G250300 5.0kb upstream 5.0kb upstream 7750 true scaffold_6: 35663005-35670754 Setaria italica
Seita.6G250300 5.0kb upstream 5.0kb upstream 5000 false scaffold_6: 35665755-35670754 Setaria italica
Seita.6G250300 5.0kb downstream 5.0kb downstream 7750 true scaffold_6: 35658005-35665754 Setaria italica
Seita.6G250300 5.0kb downstream 5.0kb downstream 5000 false scaffold_6: 35658005-35663004 Setaria italica
Seita.6G250300 10.0kb upstream 10.0kb upstream 12750 true scaffold_6: 35663005-35675754 Setaria italica
Seita.6G250300 10.0kb upstream 10.0kb upstream 10000 false scaffold_6: 35665755-35675754 Setaria italica
Seita.6G250300 10.0kb downstream 10.0kb downstream 12750 true scaffold_6: 35653005-35665754 Setaria italica
Seita.6G250300 10.0kb downstream 10.0kb downstream 10000 false scaffold_6: 35653005-35663004 Setaria italica

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122185100 5267 Panicoideae View MSA
124588819 5269 Grass View MSA
122041630 5273 Angiosperm View MSA
121309873 5274 Embryophyte View MSA
123347512 5275 Viridiplantae View MSA

20 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.255        
cufflinks 0.417        
cufflinks 0.128       Low
cufflinks 0.112       Low
cufflinks 0.171        
cufflinks 0.508        
cufflinks 0.217        
cufflinks 0.9       High
cufflinks 0.709        
cufflinks 0.521        
cufflinks 0.327        
cufflinks 0.663        
cufflinks 0.548        
cufflinks 0.276        
cufflinks 0.734        
cufflinks 0.086     Low Low
cufflinks 0.994       High
cufflinks 0.034     Low Low
cufflinks 0.249        
cufflinks 0.924       High

0 Strain