Gene : Seita.7G076900 S. italica v2.2
Defline:  (1 of 1) PTHR21240 - 2-AMINO-3-CARBOXYLMUCONATE-6-SEMIALDEHYDE DECARBOXYLASE Genomic Order:  769
Name:  ? Seita.7G076900 Secondary Identifier:  ? PAC:32703973
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Seita.7G076900 0.5kb upstream 0.5kb upstream 3985 true scaffold_7: 18096629-18100613 Setaria italica
Seita.7G076900 0.5kb upstream 0.5kb upstream 500 false scaffold_7: 18096629-18097128 Setaria italica
Seita.7G076900 0.5kb downstream 0.5kb downstream 3985 true scaffold_7: 18097129-18101113 Setaria italica
Seita.7G076900 0.5kb downstream 0.5kb downstream 500 false scaffold_7: 18100614-18101113 Setaria italica
Seita.7G076900 1.0kb upstream 1.0kb upstream 4485 true scaffold_7: 18096129-18100613 Setaria italica
Seita.7G076900 1.0kb upstream 1.0kb upstream 1000 false scaffold_7: 18096129-18097128 Setaria italica
Seita.7G076900 1.0kb downstream 1.0kb downstream 4485 true scaffold_7: 18097129-18101613 Setaria italica
Seita.7G076900 1.0kb downstream 1.0kb downstream 1000 false scaffold_7: 18100614-18101613 Setaria italica
Seita.7G076900 2.0kb upstream 2.0kb upstream 5485 true scaffold_7: 18095129-18100613 Setaria italica
Seita.7G076900 2.0kb upstream 2.0kb upstream 2000 false scaffold_7: 18095129-18097128 Setaria italica
Seita.7G076900 2.0kb downstream 2.0kb downstream 5485 true scaffold_7: 18097129-18102613 Setaria italica
Seita.7G076900 2.0kb downstream 2.0kb downstream 2000 false scaffold_7: 18100614-18102613 Setaria italica
Seita.7G076900 5.0kb upstream 5.0kb upstream 8485 true scaffold_7: 18092129-18100613 Setaria italica
Seita.7G076900 5.0kb upstream 5.0kb upstream 5000 false scaffold_7: 18092129-18097128 Setaria italica
Seita.7G076900 5.0kb downstream 5.0kb downstream 8485 true scaffold_7: 18097129-18105613 Setaria italica
Seita.7G076900 5.0kb downstream 5.0kb downstream 5000 false scaffold_7: 18100614-18105613 Setaria italica
Seita.7G076900 10.0kb upstream 10.0kb upstream 13485 true scaffold_7: 18087129-18100613 Setaria italica
Seita.7G076900 10.0kb upstream 10.0kb upstream 10000 false scaffold_7: 18087129-18097128 Setaria italica
Seita.7G076900 10.0kb downstream 10.0kb downstream 13485 true scaffold_7: 18097129-18110613 Setaria italica
Seita.7G076900 10.0kb downstream 10.0kb downstream 10000 false scaffold_7: 18100614-18110613 Setaria italica

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041304 5273 Angiosperm View MSA
122177647 5267 Panicoideae View MSA
124580772 5269 Grass View MSA
121344175 5274 Embryophyte View MSA
123425366 5275 Viridiplantae View MSA

20 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 10.424        
cufflinks 8.105        
cufflinks 6.766        
cufflinks 7.443        
cufflinks 10.232        
cufflinks 6.2        
cufflinks 18.227     High High
cufflinks 12.768        
cufflinks 24.225     High High
cufflinks 4.248        
cufflinks 6.8        
cufflinks 0.427       Low
cufflinks 0.951       Low
cufflinks 4.415        
cufflinks 0.385       Low
cufflinks 20.862     High High
cufflinks 0.371       Low
cufflinks 9.144        
cufflinks 5.092        
cufflinks 0.332       Low

0 Strain