Gene : Seita.7G076800 S. italica v2.2
Defline:  (1 of 4) PTHR24223:SF165 - ABC TRANSPORTER C FAMILY MEMBER 15-RELATED Genomic Order:  768
Name:  ? Seita.7G076800 Secondary Identifier:  ? PAC:32705516
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Seita.7G076800 0.5kb upstream 0.5kb upstream 7712 true scaffold_7: 18088677-18096388 Setaria italica
Seita.7G076800 0.5kb upstream 0.5kb upstream 500 false scaffold_7: 18088677-18089176 Setaria italica
Seita.7G076800 0.5kb downstream 0.5kb downstream 7712 true scaffold_7: 18089177-18096888 Setaria italica
Seita.7G076800 0.5kb downstream 0.5kb downstream 500 false scaffold_7: 18096389-18096888 Setaria italica
Seita.7G076800 1.0kb upstream 1.0kb upstream 8212 true scaffold_7: 18088177-18096388 Setaria italica
Seita.7G076800 1.0kb upstream 1.0kb upstream 1000 false scaffold_7: 18088177-18089176 Setaria italica
Seita.7G076800 1.0kb downstream 1.0kb downstream 8212 true scaffold_7: 18089177-18097388 Setaria italica
Seita.7G076800 1.0kb downstream 1.0kb downstream 1000 false scaffold_7: 18096389-18097388 Setaria italica
Seita.7G076800 2.0kb upstream 2.0kb upstream 9212 true scaffold_7: 18087177-18096388 Setaria italica
Seita.7G076800 2.0kb upstream 2.0kb upstream 2000 false scaffold_7: 18087177-18089176 Setaria italica
Seita.7G076800 2.0kb downstream 2.0kb downstream 9212 true scaffold_7: 18089177-18098388 Setaria italica
Seita.7G076800 2.0kb downstream 2.0kb downstream 2000 false scaffold_7: 18096389-18098388 Setaria italica
Seita.7G076800 5.0kb upstream 5.0kb upstream 12212 true scaffold_7: 18084177-18096388 Setaria italica
Seita.7G076800 5.0kb upstream 5.0kb upstream 5000 false scaffold_7: 18084177-18089176 Setaria italica
Seita.7G076800 5.0kb downstream 5.0kb downstream 12212 true scaffold_7: 18089177-18101388 Setaria italica
Seita.7G076800 5.0kb downstream 5.0kb downstream 5000 false scaffold_7: 18096389-18101388 Setaria italica
Seita.7G076800 10.0kb upstream 10.0kb upstream 17212 true scaffold_7: 18079177-18096388 Setaria italica
Seita.7G076800 10.0kb upstream 10.0kb upstream 10000 false scaffold_7: 18079177-18089176 Setaria italica
Seita.7G076800 10.0kb downstream 10.0kb downstream 17212 true scaffold_7: 18089177-18106388 Setaria italica
Seita.7G076800 10.0kb downstream 10.0kb downstream 10000 false scaffold_7: 18096389-18106388 Setaria italica

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122192409 5267 Panicoideae View MSA
124584605 5269 Grass View MSA
122042216 5273 Angiosperm View MSA
123429075 5275 Viridiplantae View MSA
121309936 5274 Embryophyte View MSA

20 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.939        
cufflinks 0.024     Low Low
cufflinks 0.076     Low  
cufflinks 0.014     Low Low
cufflinks 0.038     Low  
cufflinks 0.01     Low Low
cufflinks 0.241        
cufflinks 0.043     Low  
cufflinks 0.043     Low  
cufflinks 0.135     Low  
cufflinks 0.457        
cufflinks 11.957       High
cufflinks 0.987        
cufflinks 0.27        
cufflinks 6.979       High
cufflinks 0.208        
cufflinks 2.058        
cufflinks 3.779       High
cufflinks 0.09     Low  
cufflinks 3.755       High

0 Strain