Gene : Seita.7G080800 S. italica v2.2
Defline:  (1 of 1) PTHR15691 - PROTEIN KIAA0196 Genomic Order:  808
Name:  ? Seita.7G080800 Secondary Identifier:  ? PAC:32703494
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Seita.7G080800 0.5kb upstream 0.5kb upstream 15119 true scaffold_7: 18458939-18474057 Setaria italica
Seita.7G080800 0.5kb upstream 0.5kb upstream 500 false scaffold_7: 18473558-18474057 Setaria italica
Seita.7G080800 0.5kb downstream 0.5kb downstream 15119 true scaffold_7: 18458439-18473557 Setaria italica
Seita.7G080800 0.5kb downstream 0.5kb downstream 500 false scaffold_7: 18458439-18458938 Setaria italica
Seita.7G080800 1.0kb upstream 1.0kb upstream 15619 true scaffold_7: 18458939-18474557 Setaria italica
Seita.7G080800 1.0kb upstream 1.0kb upstream 1000 false scaffold_7: 18473558-18474557 Setaria italica
Seita.7G080800 1.0kb downstream 1.0kb downstream 15619 true scaffold_7: 18457939-18473557 Setaria italica
Seita.7G080800 1.0kb downstream 1.0kb downstream 1000 false scaffold_7: 18457939-18458938 Setaria italica
Seita.7G080800 2.0kb upstream 2.0kb upstream 16619 true scaffold_7: 18458939-18475557 Setaria italica
Seita.7G080800 2.0kb upstream 2.0kb upstream 2000 false scaffold_7: 18473558-18475557 Setaria italica
Seita.7G080800 2.0kb downstream 2.0kb downstream 16619 true scaffold_7: 18456939-18473557 Setaria italica
Seita.7G080800 2.0kb downstream 2.0kb downstream 2000 false scaffold_7: 18456939-18458938 Setaria italica
Seita.7G080800 5.0kb upstream 5.0kb upstream 19619 true scaffold_7: 18458939-18478557 Setaria italica
Seita.7G080800 5.0kb upstream 5.0kb upstream 5000 false scaffold_7: 18473558-18478557 Setaria italica
Seita.7G080800 5.0kb downstream 5.0kb downstream 19619 true scaffold_7: 18453939-18473557 Setaria italica
Seita.7G080800 5.0kb downstream 5.0kb downstream 5000 false scaffold_7: 18453939-18458938 Setaria italica
Seita.7G080800 10.0kb upstream 10.0kb upstream 24619 true scaffold_7: 18458939-18483557 Setaria italica
Seita.7G080800 10.0kb upstream 10.0kb upstream 10000 false scaffold_7: 18473558-18483557 Setaria italica
Seita.7G080800 10.0kb downstream 10.0kb downstream 24619 true scaffold_7: 18448939-18473557 Setaria italica
Seita.7G080800 10.0kb downstream 10.0kb downstream 10000 false scaffold_7: 18448939-18458938 Setaria italica

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122176402 5267 Panicoideae View MSA
124589107 5269 Grass View MSA
122050406 5273 Angiosperm View MSA
121350075 5274 Embryophyte View MSA
123426807 5275 Viridiplantae View MSA

20 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.93       High
cufflinks 3.54        
cufflinks 3.512        
cufflinks 3.089        
cufflinks 2.343       Low
cufflinks 3.494        
cufflinks 3.452        
cufflinks 2.733        
cufflinks 2.351       Low
cufflinks 2.398       Low
cufflinks 3.796        
cufflinks 2.894        
cufflinks 3.108        
cufflinks 2.558        
cufflinks 3.123        
cufflinks 5.01       High
cufflinks 2.697        
cufflinks 4.28       High
cufflinks 2.149       Low
cufflinks 2.955        

0 Strain