Gene : Seita.7G093700 S. italica v2.2
Defline:  (1 of 2) PF06916 - Protein of unknown function (DUF1279) (DUF1279) Genomic Order:  937
Name:  ? Seita.7G093700 Secondary Identifier:  ? PAC:32704439
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Seita.7G093700 0.5kb upstream 0.5kb upstream 1737 true scaffold_7: 19659813-19661549 Setaria italica
Seita.7G093700 0.5kb upstream 0.5kb upstream 500 false scaffold_7: 19659813-19660312 Setaria italica
Seita.7G093700 0.5kb downstream 0.5kb downstream 1737 true scaffold_7: 19660313-19662049 Setaria italica
Seita.7G093700 0.5kb downstream 0.5kb downstream 500 false scaffold_7: 19661550-19662049 Setaria italica
Seita.7G093700 1.0kb upstream 1.0kb upstream 2237 true scaffold_7: 19659313-19661549 Setaria italica
Seita.7G093700 1.0kb upstream 1.0kb upstream 1000 false scaffold_7: 19659313-19660312 Setaria italica
Seita.7G093700 1.0kb downstream 1.0kb downstream 2237 true scaffold_7: 19660313-19662549 Setaria italica
Seita.7G093700 1.0kb downstream 1.0kb downstream 1000 false scaffold_7: 19661550-19662549 Setaria italica
Seita.7G093700 2.0kb upstream 2.0kb upstream 3237 true scaffold_7: 19658313-19661549 Setaria italica
Seita.7G093700 2.0kb upstream 2.0kb upstream 2000 false scaffold_7: 19658313-19660312 Setaria italica
Seita.7G093700 2.0kb downstream 2.0kb downstream 3237 true scaffold_7: 19660313-19663549 Setaria italica
Seita.7G093700 2.0kb downstream 2.0kb downstream 2000 false scaffold_7: 19661550-19663549 Setaria italica
Seita.7G093700 5.0kb upstream 5.0kb upstream 6237 true scaffold_7: 19655313-19661549 Setaria italica
Seita.7G093700 5.0kb upstream 5.0kb upstream 5000 false scaffold_7: 19655313-19660312 Setaria italica
Seita.7G093700 5.0kb downstream 5.0kb downstream 6237 true scaffold_7: 19660313-19666549 Setaria italica
Seita.7G093700 5.0kb downstream 5.0kb downstream 5000 false scaffold_7: 19661550-19666549 Setaria italica
Seita.7G093700 10.0kb upstream 10.0kb upstream 11237 true scaffold_7: 19650313-19661549 Setaria italica
Seita.7G093700 10.0kb upstream 10.0kb upstream 10000 false scaffold_7: 19650313-19660312 Setaria italica
Seita.7G093700 10.0kb downstream 10.0kb downstream 11237 true scaffold_7: 19660313-19671549 Setaria italica
Seita.7G093700 10.0kb downstream 10.0kb downstream 10000 false scaffold_7: 19661550-19671549 Setaria italica

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122176607 5267 Panicoideae View MSA
124575143 5269 Grass View MSA
122046265 5273 Angiosperm View MSA
121346382 5274 Embryophyte View MSA
123424955 5275 Viridiplantae View MSA

20 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.589        
cufflinks 3.206        
cufflinks 5.268        
cufflinks 8.652        
cufflinks 9.172        
cufflinks 3.205        
cufflinks 7.478        
cufflinks 12.53       High
cufflinks 9.908        
cufflinks 7.237        
cufflinks 1.548        
cufflinks 0.711       Low
cufflinks 0.703       Low
cufflinks 14.181     High High
cufflinks 0.664       Low
cufflinks 8.587        
cufflinks 1.004       Low
cufflinks 3.321        
cufflinks 17.017     High High
cufflinks 1.145       Low

0 Strain