Gene : Seita.7G096400 S. italica v2.2
Defline:  (1 of 11) PF04755 - PAP_fibrillin (PAP_fibrillin) Genomic Order:  964
Name:  ? Seita.7G096400 Secondary Identifier:  ? PAC:32702724
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Seita.7G096400 0.5kb upstream 0.5kb upstream 3518 true scaffold_7: 19953604-19957121 Setaria italica
Seita.7G096400 0.5kb upstream 0.5kb upstream 500 false scaffold_7: 19953604-19954103 Setaria italica
Seita.7G096400 0.5kb downstream 0.5kb downstream 3518 true scaffold_7: 19954104-19957621 Setaria italica
Seita.7G096400 0.5kb downstream 0.5kb downstream 500 false scaffold_7: 19957122-19957621 Setaria italica
Seita.7G096400 1.0kb upstream 1.0kb upstream 4018 true scaffold_7: 19953104-19957121 Setaria italica
Seita.7G096400 1.0kb upstream 1.0kb upstream 1000 false scaffold_7: 19953104-19954103 Setaria italica
Seita.7G096400 1.0kb downstream 1.0kb downstream 4018 true scaffold_7: 19954104-19958121 Setaria italica
Seita.7G096400 1.0kb downstream 1.0kb downstream 1000 false scaffold_7: 19957122-19958121 Setaria italica
Seita.7G096400 2.0kb upstream 2.0kb upstream 5018 true scaffold_7: 19952104-19957121 Setaria italica
Seita.7G096400 2.0kb upstream 2.0kb upstream 2000 false scaffold_7: 19952104-19954103 Setaria italica
Seita.7G096400 2.0kb downstream 2.0kb downstream 5018 true scaffold_7: 19954104-19959121 Setaria italica
Seita.7G096400 2.0kb downstream 2.0kb downstream 2000 false scaffold_7: 19957122-19959121 Setaria italica
Seita.7G096400 5.0kb upstream 5.0kb upstream 8018 true scaffold_7: 19949104-19957121 Setaria italica
Seita.7G096400 5.0kb upstream 5.0kb upstream 5000 false scaffold_7: 19949104-19954103 Setaria italica
Seita.7G096400 5.0kb downstream 5.0kb downstream 8018 true scaffold_7: 19954104-19962121 Setaria italica
Seita.7G096400 5.0kb downstream 5.0kb downstream 5000 false scaffold_7: 19957122-19962121 Setaria italica
Seita.7G096400 10.0kb upstream 10.0kb upstream 13018 true scaffold_7: 19944104-19957121 Setaria italica
Seita.7G096400 10.0kb upstream 10.0kb upstream 10000 false scaffold_7: 19944104-19954103 Setaria italica
Seita.7G096400 10.0kb downstream 10.0kb downstream 13018 true scaffold_7: 19954104-19967121 Setaria italica
Seita.7G096400 10.0kb downstream 10.0kb downstream 10000 false scaffold_7: 19957122-19967121 Setaria italica

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122190214 5267 Panicoideae View MSA
124575122 5269 Grass View MSA
122042297 5273 Angiosperm View MSA
121345801 5274 Embryophyte View MSA
123427802 5275 Viridiplantae View MSA

20 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.661        
cufflinks 4.363        
cufflinks 8.429        
cufflinks 10.025        
cufflinks 19.461     High High
cufflinks 4.152        
cufflinks 15.128     High  
cufflinks 23.666     High High
cufflinks 22.983     High High
cufflinks 5.124        
cufflinks 5.079        
cufflinks 0.942       Low
cufflinks 0.555       Low
cufflinks 5.282        
cufflinks 1.781       Low
cufflinks 26.204     High High
cufflinks 2.358        
cufflinks 4.796        
cufflinks 8.072        
cufflinks 1.665       Low

0 Strain