Gene : Seita.7G096800 S. italica v2.2
Defline:  (1 of 1) PTHR13789//PTHR13789:SF234 - MONOOXYGENASE Genomic Order:  968
Name:  ? Seita.7G096800 Secondary Identifier:  ? PAC:32705510
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Seita.7G096800 0.5kb upstream 0.5kb upstream 2463 true scaffold_7: 19971405-19973867 Setaria italica
Seita.7G096800 0.5kb upstream 0.5kb upstream 500 false scaffold_7: 19971405-19971904 Setaria italica
Seita.7G096800 0.5kb downstream 0.5kb downstream 2463 true scaffold_7: 19971905-19974367 Setaria italica
Seita.7G096800 0.5kb downstream 0.5kb downstream 500 false scaffold_7: 19973868-19974367 Setaria italica
Seita.7G096800 1.0kb upstream 1.0kb upstream 2963 true scaffold_7: 19970905-19973867 Setaria italica
Seita.7G096800 1.0kb upstream 1.0kb upstream 1000 false scaffold_7: 19970905-19971904 Setaria italica
Seita.7G096800 1.0kb downstream 1.0kb downstream 2963 true scaffold_7: 19971905-19974867 Setaria italica
Seita.7G096800 1.0kb downstream 1.0kb downstream 1000 false scaffold_7: 19973868-19974867 Setaria italica
Seita.7G096800 2.0kb upstream 2.0kb upstream 3963 true scaffold_7: 19969905-19973867 Setaria italica
Seita.7G096800 2.0kb upstream 2.0kb upstream 2000 false scaffold_7: 19969905-19971904 Setaria italica
Seita.7G096800 2.0kb downstream 2.0kb downstream 3963 true scaffold_7: 19971905-19975867 Setaria italica
Seita.7G096800 2.0kb downstream 2.0kb downstream 2000 false scaffold_7: 19973868-19975867 Setaria italica
Seita.7G096800 5.0kb upstream 5.0kb upstream 6963 true scaffold_7: 19966905-19973867 Setaria italica
Seita.7G096800 5.0kb upstream 5.0kb upstream 5000 false scaffold_7: 19966905-19971904 Setaria italica
Seita.7G096800 5.0kb downstream 5.0kb downstream 6963 true scaffold_7: 19971905-19978867 Setaria italica
Seita.7G096800 5.0kb downstream 5.0kb downstream 5000 false scaffold_7: 19973868-19978867 Setaria italica
Seita.7G096800 10.0kb upstream 10.0kb upstream 11963 true scaffold_7: 19961905-19973867 Setaria italica
Seita.7G096800 10.0kb upstream 10.0kb upstream 10000 false scaffold_7: 19961905-19971904 Setaria italica
Seita.7G096800 10.0kb downstream 10.0kb downstream 11963 true scaffold_7: 19971905-19983867 Setaria italica
Seita.7G096800 10.0kb downstream 10.0kb downstream 10000 false scaffold_7: 19973868-19983867 Setaria italica

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122188813 5267 Panicoideae View MSA
124582132 5269 Grass View MSA
122051519 5273 Angiosperm View MSA
123429089 5275 Viridiplantae View MSA
121349985 5274 Embryophyte View MSA

20 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.714        
cufflinks 0.142       Low
cufflinks 0.518        
cufflinks 0.568        
cufflinks 0.323        
cufflinks 0.366        
cufflinks 0.403        
cufflinks 0.611        
cufflinks 0.138       Low
cufflinks 4.637       High
cufflinks 0.896        
cufflinks 0.548        
cufflinks 1.041        
cufflinks 1.241        
cufflinks 1.202        
cufflinks 0.177       Low
cufflinks 1.198        
cufflinks 0.075     Low Low
cufflinks 1.125        
cufflinks 1.657       High

0 Strain