Gene : Seita.7G097800 S. italica v2.2
Defline:  (1 of 1) PTHR13339 - COP9 SIGNALOSOME COMPLEX SUBUNIT 8 Genomic Order:  978
Name:  ? Seita.7G097800 Secondary Identifier:  ? PAC:32702403
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Seita.7G097800 0.5kb upstream 0.5kb upstream 3952 true scaffold_7: 20086809-20090760 Setaria italica
Seita.7G097800 0.5kb upstream 0.5kb upstream 500 false scaffold_7: 20090261-20090760 Setaria italica
Seita.7G097800 0.5kb downstream 0.5kb downstream 3952 true scaffold_7: 20086309-20090260 Setaria italica
Seita.7G097800 0.5kb downstream 0.5kb downstream 500 false scaffold_7: 20086309-20086808 Setaria italica
Seita.7G097800 1.0kb upstream 1.0kb upstream 4452 true scaffold_7: 20086809-20091260 Setaria italica
Seita.7G097800 1.0kb upstream 1.0kb upstream 1000 false scaffold_7: 20090261-20091260 Setaria italica
Seita.7G097800 1.0kb downstream 1.0kb downstream 4452 true scaffold_7: 20085809-20090260 Setaria italica
Seita.7G097800 1.0kb downstream 1.0kb downstream 1000 false scaffold_7: 20085809-20086808 Setaria italica
Seita.7G097800 2.0kb upstream 2.0kb upstream 5452 true scaffold_7: 20086809-20092260 Setaria italica
Seita.7G097800 2.0kb upstream 2.0kb upstream 2000 false scaffold_7: 20090261-20092260 Setaria italica
Seita.7G097800 2.0kb downstream 2.0kb downstream 5452 true scaffold_7: 20084809-20090260 Setaria italica
Seita.7G097800 2.0kb downstream 2.0kb downstream 2000 false scaffold_7: 20084809-20086808 Setaria italica
Seita.7G097800 5.0kb upstream 5.0kb upstream 8452 true scaffold_7: 20086809-20095260 Setaria italica
Seita.7G097800 5.0kb upstream 5.0kb upstream 5000 false scaffold_7: 20090261-20095260 Setaria italica
Seita.7G097800 5.0kb downstream 5.0kb downstream 8452 true scaffold_7: 20081809-20090260 Setaria italica
Seita.7G097800 5.0kb downstream 5.0kb downstream 5000 false scaffold_7: 20081809-20086808 Setaria italica
Seita.7G097800 10.0kb upstream 10.0kb upstream 13452 true scaffold_7: 20086809-20100260 Setaria italica
Seita.7G097800 10.0kb upstream 10.0kb upstream 10000 false scaffold_7: 20090261-20100260 Setaria italica
Seita.7G097800 10.0kb downstream 10.0kb downstream 13452 true scaffold_7: 20076809-20090260 Setaria italica
Seita.7G097800 10.0kb downstream 10.0kb downstream 10000 false scaffold_7: 20076809-20086808 Setaria italica

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122190631 5267 Panicoideae View MSA
124577603 5269 Grass View MSA
122042983 5273 Angiosperm View MSA
121348837 5274 Embryophyte View MSA
123425224 5275 Viridiplantae View MSA

20 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.993        
cufflinks 6.536       High
cufflinks 2.597        
cufflinks 2.2        
cufflinks 2.477        
cufflinks 6.209       High
cufflinks 2.802        
cufflinks 4.787        
cufflinks 2.624        
cufflinks 6.321       High
cufflinks 3.312        
cufflinks 3.984        
cufflinks 4.022        
cufflinks 3.685        
cufflinks 4.574        
cufflinks 1.376       Low
cufflinks 5.155        
cufflinks 1.651       Low
cufflinks 2.31        
cufflinks 5.162        

0 Strain