Gene : Seita.7G101400 S. italica v2.2
Defline:  (1 of 1) PTHR21389 - P53 INDUCED PROTEIN Genomic Order:  1014
Name:  ? Seita.7G101400 Secondary Identifier:  ? PAC:32705082
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Seita.7G101400 0.5kb upstream 0.5kb upstream 5934 true scaffold_7: 20375929-20381862 Setaria italica
Seita.7G101400 0.5kb upstream 0.5kb upstream 500 false scaffold_7: 20375929-20376428 Setaria italica
Seita.7G101400 0.5kb downstream 0.5kb downstream 5934 true scaffold_7: 20376429-20382362 Setaria italica
Seita.7G101400 0.5kb downstream 0.5kb downstream 500 false scaffold_7: 20381863-20382362 Setaria italica
Seita.7G101400 1.0kb upstream 1.0kb upstream 6434 true scaffold_7: 20375429-20381862 Setaria italica
Seita.7G101400 1.0kb upstream 1.0kb upstream 1000 false scaffold_7: 20375429-20376428 Setaria italica
Seita.7G101400 1.0kb downstream 1.0kb downstream 6434 true scaffold_7: 20376429-20382862 Setaria italica
Seita.7G101400 1.0kb downstream 1.0kb downstream 1000 false scaffold_7: 20381863-20382862 Setaria italica
Seita.7G101400 2.0kb upstream 2.0kb upstream 7434 true scaffold_7: 20374429-20381862 Setaria italica
Seita.7G101400 2.0kb upstream 2.0kb upstream 2000 false scaffold_7: 20374429-20376428 Setaria italica
Seita.7G101400 2.0kb downstream 2.0kb downstream 7434 true scaffold_7: 20376429-20383862 Setaria italica
Seita.7G101400 2.0kb downstream 2.0kb downstream 2000 false scaffold_7: 20381863-20383862 Setaria italica
Seita.7G101400 5.0kb upstream 5.0kb upstream 10434 true scaffold_7: 20371429-20381862 Setaria italica
Seita.7G101400 5.0kb upstream 5.0kb upstream 5000 false scaffold_7: 20371429-20376428 Setaria italica
Seita.7G101400 5.0kb downstream 5.0kb downstream 10434 true scaffold_7: 20376429-20386862 Setaria italica
Seita.7G101400 5.0kb downstream 5.0kb downstream 5000 false scaffold_7: 20381863-20386862 Setaria italica
Seita.7G101400 10.0kb upstream 10.0kb upstream 15434 true scaffold_7: 20366429-20381862 Setaria italica
Seita.7G101400 10.0kb upstream 10.0kb upstream 10000 false scaffold_7: 20366429-20376428 Setaria italica
Seita.7G101400 10.0kb downstream 10.0kb downstream 15434 true scaffold_7: 20376429-20391862 Setaria italica
Seita.7G101400 10.0kb downstream 10.0kb downstream 10000 false scaffold_7: 20381863-20391862 Setaria italica

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122182179 5267 Panicoideae View MSA
124572632 5269 Grass View MSA
122041577 5273 Angiosperm View MSA
121347072 5274 Embryophyte View MSA
123425486 5275 Viridiplantae View MSA

20 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.366        
cufflinks 5.79        
cufflinks 4.315        
cufflinks 4.124        
cufflinks 2.897       Low
cufflinks 5.063        
cufflinks 4.572        
cufflinks 4.189        
cufflinks 3.238       Low
cufflinks 6.773        
cufflinks 5.761        
cufflinks 8.751       High
cufflinks 6.781        
cufflinks 4.275        
cufflinks 6.41        
cufflinks 7.634        
cufflinks 5.659        
cufflinks 11.696     High High
cufflinks 3.506       Low
cufflinks 5.821        

0 Strain