Gene : Seita.7G108400 S. italica v2.2
Defline:  (1 of 1) PF01713//PF08590 - Smr domain (Smr) // Domain of unknown function (DUF1771) (DUF1771) Genomic Order:  1084
Name:  ? Seita.7G108400 Secondary Identifier:  ? PAC:32702509
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Seita.7G108400 0.5kb upstream 0.5kb upstream 4032 true scaffold_7: 20910965-20914996 Setaria italica
Seita.7G108400 0.5kb upstream 0.5kb upstream 500 false scaffold_7: 20910965-20911464 Setaria italica
Seita.7G108400 0.5kb downstream 0.5kb downstream 4032 true scaffold_7: 20911465-20915496 Setaria italica
Seita.7G108400 0.5kb downstream 0.5kb downstream 500 false scaffold_7: 20914997-20915496 Setaria italica
Seita.7G108400 1.0kb upstream 1.0kb upstream 4532 true scaffold_7: 20910465-20914996 Setaria italica
Seita.7G108400 1.0kb upstream 1.0kb upstream 1000 false scaffold_7: 20910465-20911464 Setaria italica
Seita.7G108400 1.0kb downstream 1.0kb downstream 4532 true scaffold_7: 20911465-20915996 Setaria italica
Seita.7G108400 1.0kb downstream 1.0kb downstream 1000 false scaffold_7: 20914997-20915996 Setaria italica
Seita.7G108400 2.0kb upstream 2.0kb upstream 5532 true scaffold_7: 20909465-20914996 Setaria italica
Seita.7G108400 2.0kb upstream 2.0kb upstream 2000 false scaffold_7: 20909465-20911464 Setaria italica
Seita.7G108400 2.0kb downstream 2.0kb downstream 5532 true scaffold_7: 20911465-20916996 Setaria italica
Seita.7G108400 2.0kb downstream 2.0kb downstream 2000 false scaffold_7: 20914997-20916996 Setaria italica
Seita.7G108400 5.0kb upstream 5.0kb upstream 8532 true scaffold_7: 20906465-20914996 Setaria italica
Seita.7G108400 5.0kb upstream 5.0kb upstream 5000 false scaffold_7: 20906465-20911464 Setaria italica
Seita.7G108400 5.0kb downstream 5.0kb downstream 8532 true scaffold_7: 20911465-20919996 Setaria italica
Seita.7G108400 5.0kb downstream 5.0kb downstream 5000 false scaffold_7: 20914997-20919996 Setaria italica
Seita.7G108400 10.0kb upstream 10.0kb upstream 13532 true scaffold_7: 20901465-20914996 Setaria italica
Seita.7G108400 10.0kb upstream 10.0kb upstream 10000 false scaffold_7: 20901465-20911464 Setaria italica
Seita.7G108400 10.0kb downstream 10.0kb downstream 13532 true scaffold_7: 20911465-20924996 Setaria italica
Seita.7G108400 10.0kb downstream 10.0kb downstream 10000 false scaffold_7: 20914997-20924996 Setaria italica

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026433 5273 Angiosperm View MSA
122180429 5267 Panicoideae View MSA
124568986 5269 Grass View MSA
121344234 5274 Embryophyte View MSA
123380011 5275 Viridiplantae View MSA

20 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 8.798        
cufflinks 8.848        
cufflinks 10.013        
cufflinks 8.273        
cufflinks 5.931       Low
cufflinks 9.606        
cufflinks 8.348        
cufflinks 7.362        
cufflinks 6.559       Low
cufflinks 7.978        
cufflinks 8.495        
cufflinks 18.817     High High
cufflinks 14.682     High  
cufflinks 13.434        
cufflinks 22.3     High High
cufflinks 7.03        
cufflinks 17.138     High High
cufflinks 5.941       Low
cufflinks 9.479        
cufflinks 20.87     High High

0 Strain