Gene : Seita.7G107700 S. italica v2.2
Defline:  (1 of 4) PTHR10903//PTHR10903:SF66 - GTPASE, IMAP FAMILY MEMBER-RELATED Genomic Order:  1077
Name:  ? Seita.7G107700 Secondary Identifier:  ? PAC:32702258
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Seita.7G107700 0.5kb upstream 0.5kb upstream 2962 true scaffold_7: 20821207-20824168 Setaria italica
Seita.7G107700 0.5kb upstream 0.5kb upstream 500 false scaffold_7: 20821207-20821706 Setaria italica
Seita.7G107700 0.5kb downstream 0.5kb downstream 2962 true scaffold_7: 20821707-20824668 Setaria italica
Seita.7G107700 0.5kb downstream 0.5kb downstream 500 false scaffold_7: 20824169-20824668 Setaria italica
Seita.7G107700 1.0kb upstream 1.0kb upstream 3462 true scaffold_7: 20820707-20824168 Setaria italica
Seita.7G107700 1.0kb upstream 1.0kb upstream 1000 false scaffold_7: 20820707-20821706 Setaria italica
Seita.7G107700 1.0kb downstream 1.0kb downstream 3462 true scaffold_7: 20821707-20825168 Setaria italica
Seita.7G107700 1.0kb downstream 1.0kb downstream 1000 false scaffold_7: 20824169-20825168 Setaria italica
Seita.7G107700 2.0kb upstream 2.0kb upstream 4462 true scaffold_7: 20819707-20824168 Setaria italica
Seita.7G107700 2.0kb upstream 2.0kb upstream 2000 false scaffold_7: 20819707-20821706 Setaria italica
Seita.7G107700 2.0kb downstream 2.0kb downstream 4462 true scaffold_7: 20821707-20826168 Setaria italica
Seita.7G107700 2.0kb downstream 2.0kb downstream 2000 false scaffold_7: 20824169-20826168 Setaria italica
Seita.7G107700 5.0kb upstream 5.0kb upstream 7462 true scaffold_7: 20816707-20824168 Setaria italica
Seita.7G107700 5.0kb upstream 5.0kb upstream 5000 false scaffold_7: 20816707-20821706 Setaria italica
Seita.7G107700 5.0kb downstream 5.0kb downstream 7462 true scaffold_7: 20821707-20829168 Setaria italica
Seita.7G107700 5.0kb downstream 5.0kb downstream 5000 false scaffold_7: 20824169-20829168 Setaria italica
Seita.7G107700 10.0kb upstream 10.0kb upstream 12462 true scaffold_7: 20811707-20824168 Setaria italica
Seita.7G107700 10.0kb upstream 10.0kb upstream 10000 false scaffold_7: 20811707-20821706 Setaria italica
Seita.7G107700 10.0kb downstream 10.0kb downstream 12462 true scaffold_7: 20821707-20834168 Setaria italica
Seita.7G107700 10.0kb downstream 10.0kb downstream 10000 false scaffold_7: 20824169-20834168 Setaria italica

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121794976 5273 Angiosperm Singleton cluster - no MSA
122054588 5267 Panicoideae Singleton cluster - no MSA
124354410 5269 Grass Singleton cluster - no MSA
121066149 5274 Embryophyte Singleton cluster - no MSA
123105809 5275 Viridiplantae Singleton cluster - no MSA

20 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.01     Low  
cufflinks 0.007     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.009     Low  
cufflinks 0.007     Low  
cufflinks 0.014     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.004     Low Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.013     Low  
cufflinks 0.007     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.035     Low High

0 Strain