Gene : Seita.7G042300 S. italica v2.2
Defline:  (1 of 3) PTHR11764//PTHR11764:SF21 - LANOSTEROL SYNTHASE Genomic Order:  423
Name:  ? Seita.7G042300 Secondary Identifier:  ? PAC:32703495
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Seita.7G042300 0.5kb upstream 0.5kb upstream 23470 true scaffold_7: 12991715-13015184 Setaria italica
Seita.7G042300 0.5kb upstream 0.5kb upstream 500 false scaffold_7: 12991715-12992214 Setaria italica
Seita.7G042300 0.5kb downstream 0.5kb downstream 23470 true scaffold_7: 12992215-13015684 Setaria italica
Seita.7G042300 0.5kb downstream 0.5kb downstream 500 false scaffold_7: 13015185-13015684 Setaria italica
Seita.7G042300 1.0kb upstream 1.0kb upstream 23970 true scaffold_7: 12991215-13015184 Setaria italica
Seita.7G042300 1.0kb upstream 1.0kb upstream 1000 false scaffold_7: 12991215-12992214 Setaria italica
Seita.7G042300 1.0kb downstream 1.0kb downstream 23970 true scaffold_7: 12992215-13016184 Setaria italica
Seita.7G042300 1.0kb downstream 1.0kb downstream 1000 false scaffold_7: 13015185-13016184 Setaria italica
Seita.7G042300 2.0kb upstream 2.0kb upstream 24970 true scaffold_7: 12990215-13015184 Setaria italica
Seita.7G042300 2.0kb upstream 2.0kb upstream 2000 false scaffold_7: 12990215-12992214 Setaria italica
Seita.7G042300 2.0kb downstream 2.0kb downstream 24970 true scaffold_7: 12992215-13017184 Setaria italica
Seita.7G042300 2.0kb downstream 2.0kb downstream 2000 false scaffold_7: 13015185-13017184 Setaria italica
Seita.7G042300 5.0kb upstream 5.0kb upstream 27970 true scaffold_7: 12987215-13015184 Setaria italica
Seita.7G042300 5.0kb upstream 5.0kb upstream 5000 false scaffold_7: 12987215-12992214 Setaria italica
Seita.7G042300 5.0kb downstream 5.0kb downstream 27970 true scaffold_7: 12992215-13020184 Setaria italica
Seita.7G042300 5.0kb downstream 5.0kb downstream 5000 false scaffold_7: 13015185-13020184 Setaria italica
Seita.7G042300 10.0kb upstream 10.0kb upstream 32970 true scaffold_7: 12982215-13015184 Setaria italica
Seita.7G042300 10.0kb upstream 10.0kb upstream 10000 false scaffold_7: 12982215-12992214 Setaria italica
Seita.7G042300 10.0kb downstream 10.0kb downstream 32970 true scaffold_7: 12992215-13025184 Setaria italica
Seita.7G042300 10.0kb downstream 10.0kb downstream 10000 false scaffold_7: 13015185-13025184 Setaria italica

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122028959 5273 Angiosperm View MSA
122197932 5267 Panicoideae View MSA
124590016 5269 Grass View MSA
121298379 5274 Embryophyte View MSA
123336355 5275 Viridiplantae View MSA

20 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.677        
cufflinks 4.952       High
cufflinks 0.108        
cufflinks 0.251        
cufflinks 0.265        
cufflinks 3.722       High
cufflinks 1.191        
cufflinks 2.112        
cufflinks 0.204        
cufflinks 3.638       High
cufflinks 3.83       High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.152        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.336        
cufflinks 0.012     Low Low
cufflinks 0.152        
cufflinks 0.119        
cufflinks 0.0     Not Expressed Not Expressed

0 Strain