Gene : Seita.7G045400 S. italica v2.2
Defline:  (1 of 1) PTHR19297//PTHR19297:SF100 - GLYCOSYLTRANSFERASE 14 FAMILY MEMBER Genomic Order:  454
Name:  ? Seita.7G045400 Secondary Identifier:  ? PAC:32703113
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Seita.7G045400 0.5kb upstream 0.5kb upstream 7088 true scaffold_7: 13569775-13576862 Setaria italica
Seita.7G045400 0.5kb upstream 0.5kb upstream 500 false scaffold_7: 13576363-13576862 Setaria italica
Seita.7G045400 0.5kb downstream 0.5kb downstream 7088 true scaffold_7: 13569275-13576362 Setaria italica
Seita.7G045400 0.5kb downstream 0.5kb downstream 500 false scaffold_7: 13569275-13569774 Setaria italica
Seita.7G045400 1.0kb upstream 1.0kb upstream 7588 true scaffold_7: 13569775-13577362 Setaria italica
Seita.7G045400 1.0kb upstream 1.0kb upstream 1000 false scaffold_7: 13576363-13577362 Setaria italica
Seita.7G045400 1.0kb downstream 1.0kb downstream 7588 true scaffold_7: 13568775-13576362 Setaria italica
Seita.7G045400 1.0kb downstream 1.0kb downstream 1000 false scaffold_7: 13568775-13569774 Setaria italica
Seita.7G045400 2.0kb upstream 2.0kb upstream 8588 true scaffold_7: 13569775-13578362 Setaria italica
Seita.7G045400 2.0kb upstream 2.0kb upstream 2000 false scaffold_7: 13576363-13578362 Setaria italica
Seita.7G045400 2.0kb downstream 2.0kb downstream 8588 true scaffold_7: 13567775-13576362 Setaria italica
Seita.7G045400 2.0kb downstream 2.0kb downstream 2000 false scaffold_7: 13567775-13569774 Setaria italica
Seita.7G045400 5.0kb upstream 5.0kb upstream 11588 true scaffold_7: 13569775-13581362 Setaria italica
Seita.7G045400 5.0kb upstream 5.0kb upstream 5000 false scaffold_7: 13576363-13581362 Setaria italica
Seita.7G045400 5.0kb downstream 5.0kb downstream 11588 true scaffold_7: 13564775-13576362 Setaria italica
Seita.7G045400 5.0kb downstream 5.0kb downstream 5000 false scaffold_7: 13564775-13569774 Setaria italica
Seita.7G045400 10.0kb upstream 10.0kb upstream 16588 true scaffold_7: 13569775-13586362 Setaria italica
Seita.7G045400 10.0kb upstream 10.0kb upstream 10000 false scaffold_7: 13576363-13586362 Setaria italica
Seita.7G045400 10.0kb downstream 10.0kb downstream 16588 true scaffold_7: 13559775-13576362 Setaria italica
Seita.7G045400 10.0kb downstream 10.0kb downstream 10000 false scaffold_7: 13559775-13569774 Setaria italica

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122116099 5267 Panicoideae View MSA
124578819 5269 Grass View MSA
122050409 5273 Angiosperm View MSA
121311894 5274 Embryophyte View MSA
123349128 5275 Viridiplantae View MSA

20 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.706        
cufflinks 1.424        
cufflinks 0.274       Low
cufflinks 0.264       Low
cufflinks 0.299       Low
cufflinks 1.519        
cufflinks 1.005        
cufflinks 0.832        
cufflinks 0.523        
cufflinks 1.696        
cufflinks 1.448        
cufflinks 2.432       High
cufflinks 1.991       High
cufflinks 1.277        
cufflinks 1.432        
cufflinks 0.624        
cufflinks 0.893        
cufflinks 1.607        
cufflinks 1.066        
cufflinks 1.209        

0 Strain