Gene : Seita.7G057100 S. italica v2.2
Defline:  (1 of 1) PTHR13286//PTHR13286:SF8 - SAP30 Genomic Order:  571
Name:  ? Seita.7G057100 Secondary Identifier:  ? PAC:32704969
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Seita.7G057100 0.5kb upstream 0.5kb upstream 4759 true scaffold_7: 15594042-15598800 Setaria italica
Seita.7G057100 0.5kb upstream 0.5kb upstream 500 false scaffold_7: 15594042-15594541 Setaria italica
Seita.7G057100 0.5kb downstream 0.5kb downstream 4759 true scaffold_7: 15594542-15599300 Setaria italica
Seita.7G057100 0.5kb downstream 0.5kb downstream 500 false scaffold_7: 15598801-15599300 Setaria italica
Seita.7G057100 1.0kb upstream 1.0kb upstream 5259 true scaffold_7: 15593542-15598800 Setaria italica
Seita.7G057100 1.0kb upstream 1.0kb upstream 1000 false scaffold_7: 15593542-15594541 Setaria italica
Seita.7G057100 1.0kb downstream 1.0kb downstream 5259 true scaffold_7: 15594542-15599800 Setaria italica
Seita.7G057100 1.0kb downstream 1.0kb downstream 1000 false scaffold_7: 15598801-15599800 Setaria italica
Seita.7G057100 2.0kb upstream 2.0kb upstream 6259 true scaffold_7: 15592542-15598800 Setaria italica
Seita.7G057100 2.0kb upstream 2.0kb upstream 2000 false scaffold_7: 15592542-15594541 Setaria italica
Seita.7G057100 2.0kb downstream 2.0kb downstream 6259 true scaffold_7: 15594542-15600800 Setaria italica
Seita.7G057100 2.0kb downstream 2.0kb downstream 2000 false scaffold_7: 15598801-15600800 Setaria italica
Seita.7G057100 5.0kb upstream 5.0kb upstream 9259 true scaffold_7: 15589542-15598800 Setaria italica
Seita.7G057100 5.0kb upstream 5.0kb upstream 5000 false scaffold_7: 15589542-15594541 Setaria italica
Seita.7G057100 5.0kb downstream 5.0kb downstream 9259 true scaffold_7: 15594542-15603800 Setaria italica
Seita.7G057100 5.0kb downstream 5.0kb downstream 5000 false scaffold_7: 15598801-15603800 Setaria italica
Seita.7G057100 10.0kb upstream 10.0kb upstream 14259 true scaffold_7: 15584542-15598800 Setaria italica
Seita.7G057100 10.0kb upstream 10.0kb upstream 10000 false scaffold_7: 15584542-15594541 Setaria italica
Seita.7G057100 10.0kb downstream 10.0kb downstream 14259 true scaffold_7: 15594542-15608800 Setaria italica
Seita.7G057100 10.0kb downstream 10.0kb downstream 10000 false scaffold_7: 15598801-15608800 Setaria italica

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122116706 5267 Panicoideae View MSA
124585819 5269 Grass View MSA
122051007 5273 Angiosperm View MSA
121350494 5274 Embryophyte View MSA
123427737 5275 Viridiplantae View MSA

20 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.82       High
cufflinks 9.348       High
cufflinks 0.487       Low
cufflinks 0.768       Low
cufflinks 1.175       Low
cufflinks 8.147       High
cufflinks 5.134        
cufflinks 3.66        
cufflinks 4.365        
cufflinks 5.992        
cufflinks 5.169        
cufflinks 2.481        
cufflinks 1.782        
cufflinks 0.713       Low
cufflinks 3.761        
cufflinks 4.049        
cufflinks 3.264        
cufflinks 3.559        
cufflinks 1.545        
cufflinks 3.396        

0 Strain