Gene : Seita.7G067400 S. italica v2.2
Defline:  (1 of 1) PTHR31155//PTHR31155:SF11 - ACYL- ACYL-CARRIER-PROTEIN DESATURASE-RELATED Genomic Order:  674
Name:  ? Seita.7G067400 Secondary Identifier:  ? PAC:32703389
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Sitalica PWY-5147 Setaria italica pathologic  
Sitalica PWY-5156 Setaria italica pathologic  
Sitalica PWY-5366 Setaria italica pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Seita.7G067400 0.5kb upstream 0.5kb upstream 3886 true scaffold_7: 17035916-17039801 Setaria italica
Seita.7G067400 0.5kb upstream 0.5kb upstream 500 false scaffold_7: 17039302-17039801 Setaria italica
Seita.7G067400 0.5kb downstream 0.5kb downstream 3886 true scaffold_7: 17035416-17039301 Setaria italica
Seita.7G067400 0.5kb downstream 0.5kb downstream 500 false scaffold_7: 17035416-17035915 Setaria italica
Seita.7G067400 1.0kb upstream 1.0kb upstream 4386 true scaffold_7: 17035916-17040301 Setaria italica
Seita.7G067400 1.0kb upstream 1.0kb upstream 1000 false scaffold_7: 17039302-17040301 Setaria italica
Seita.7G067400 1.0kb downstream 1.0kb downstream 4386 true scaffold_7: 17034916-17039301 Setaria italica
Seita.7G067400 1.0kb downstream 1.0kb downstream 1000 false scaffold_7: 17034916-17035915 Setaria italica
Seita.7G067400 2.0kb upstream 2.0kb upstream 5386 true scaffold_7: 17035916-17041301 Setaria italica
Seita.7G067400 2.0kb upstream 2.0kb upstream 2000 false scaffold_7: 17039302-17041301 Setaria italica
Seita.7G067400 2.0kb downstream 2.0kb downstream 5386 true scaffold_7: 17033916-17039301 Setaria italica
Seita.7G067400 2.0kb downstream 2.0kb downstream 2000 false scaffold_7: 17033916-17035915 Setaria italica
Seita.7G067400 5.0kb upstream 5.0kb upstream 8386 true scaffold_7: 17035916-17044301 Setaria italica
Seita.7G067400 5.0kb upstream 5.0kb upstream 5000 false scaffold_7: 17039302-17044301 Setaria italica
Seita.7G067400 5.0kb downstream 5.0kb downstream 8386 true scaffold_7: 17030916-17039301 Setaria italica
Seita.7G067400 5.0kb downstream 5.0kb downstream 5000 false scaffold_7: 17030916-17035915 Setaria italica
Seita.7G067400 10.0kb upstream 10.0kb upstream 13386 true scaffold_7: 17035916-17049301 Setaria italica
Seita.7G067400 10.0kb upstream 10.0kb upstream 10000 false scaffold_7: 17039302-17049301 Setaria italica
Seita.7G067400 10.0kb downstream 10.0kb downstream 13386 true scaffold_7: 17025916-17039301 Setaria italica
Seita.7G067400 10.0kb downstream 10.0kb downstream 10000 false scaffold_7: 17025916-17035915 Setaria italica

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122194577 5267 Panicoideae View MSA
124575489 5269 Grass View MSA
122047247 5273 Angiosperm View MSA
121347152 5274 Embryophyte View MSA
123428838 5275 Viridiplantae View MSA

20 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 149.665     High High
cufflinks 122.954     High High
cufflinks 111.338     High  
cufflinks 93.832     High  
cufflinks 64.487     High  
cufflinks 93.255     High  
cufflinks 41.069     High Low
cufflinks 51.195     High Low
cufflinks 37.526     High Low
cufflinks 75.681     High  
cufflinks 91.486     High  
cufflinks 91.077     High  
cufflinks 69.743     High  
cufflinks 98.317     High  
cufflinks 79.866     High  
cufflinks 58.042     High  
cufflinks 90.829     High  
cufflinks 128.809     High High
cufflinks 85.002     High  
cufflinks 80.882     High  

0 Strain