Gene : Seita.7G067700 S. italica v2.2
Genomic Order:  677 Name:  ? Seita.7G067700
Secondary Identifier:  ? PAC:32703736
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Seita.7G067700 0.5kb upstream 0.5kb upstream 3531 true scaffold_7: 17072802-17076332 Setaria italica
Seita.7G067700 0.5kb upstream 0.5kb upstream 500 false scaffold_7: 17072802-17073301 Setaria italica
Seita.7G067700 0.5kb downstream 0.5kb downstream 3531 true scaffold_7: 17073302-17076832 Setaria italica
Seita.7G067700 0.5kb downstream 0.5kb downstream 500 false scaffold_7: 17076333-17076832 Setaria italica
Seita.7G067700 1.0kb upstream 1.0kb upstream 4031 true scaffold_7: 17072302-17076332 Setaria italica
Seita.7G067700 1.0kb upstream 1.0kb upstream 1000 false scaffold_7: 17072302-17073301 Setaria italica
Seita.7G067700 1.0kb downstream 1.0kb downstream 4031 true scaffold_7: 17073302-17077332 Setaria italica
Seita.7G067700 1.0kb downstream 1.0kb downstream 1000 false scaffold_7: 17076333-17077332 Setaria italica
Seita.7G067700 2.0kb upstream 2.0kb upstream 5031 true scaffold_7: 17071302-17076332 Setaria italica
Seita.7G067700 2.0kb upstream 2.0kb upstream 2000 false scaffold_7: 17071302-17073301 Setaria italica
Seita.7G067700 2.0kb downstream 2.0kb downstream 5031 true scaffold_7: 17073302-17078332 Setaria italica
Seita.7G067700 2.0kb downstream 2.0kb downstream 2000 false scaffold_7: 17076333-17078332 Setaria italica
Seita.7G067700 5.0kb upstream 5.0kb upstream 8031 true scaffold_7: 17068302-17076332 Setaria italica
Seita.7G067700 5.0kb upstream 5.0kb upstream 5000 false scaffold_7: 17068302-17073301 Setaria italica
Seita.7G067700 5.0kb downstream 5.0kb downstream 8031 true scaffold_7: 17073302-17081332 Setaria italica
Seita.7G067700 5.0kb downstream 5.0kb downstream 5000 false scaffold_7: 17076333-17081332 Setaria italica
Seita.7G067700 10.0kb upstream 10.0kb upstream 13031 true scaffold_7: 17063302-17076332 Setaria italica
Seita.7G067700 10.0kb upstream 10.0kb upstream 10000 false scaffold_7: 17063302-17073301 Setaria italica
Seita.7G067700 10.0kb downstream 10.0kb downstream 13031 true scaffold_7: 17073302-17086332 Setaria italica
Seita.7G067700 10.0kb downstream 10.0kb downstream 10000 false scaffold_7: 17076333-17086332 Setaria italica

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122186964 5267 Panicoideae View MSA
124588220 5269 Grass View MSA
122050080 5273 Angiosperm View MSA
121311726 5274 Embryophyte View MSA
123348985 5275 Viridiplantae View MSA

20 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.45        
cufflinks 0.924        
cufflinks 0.186       Low
cufflinks 0.558       Low
cufflinks 2.586       High
cufflinks 0.723        
cufflinks 0.959        
cufflinks 1.648        
cufflinks 4.017       High
cufflinks 0.87        
cufflinks 1.516        
cufflinks 1.051        
cufflinks 0.87        
cufflinks 1.766        
cufflinks 1.873        
cufflinks 2.928       High
cufflinks 0.925        
cufflinks 0.458       Low
cufflinks 0.996        
cufflinks 1.668        

0 Strain