Gene : Seita.7G070000 S. italica v2.2
Defline:  (1 of 2) PTHR31945:SF17 - TRANSCRIPTION FACTOR FER-LIKE IRON DEFICIENCY-INDUCED TRANSCRIPTION FACTOR Genomic Order:  700
Name:  ? Seita.7G070000 Secondary Identifier:  ? PAC:32702306
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Seita.7G070000 0.5kb upstream 0.5kb upstream 3361 true scaffold_7: 17398511-17401871 Setaria italica
Seita.7G070000 0.5kb upstream 0.5kb upstream 500 false scaffold_7: 17398511-17399010 Setaria italica
Seita.7G070000 0.5kb downstream 0.5kb downstream 3361 true scaffold_7: 17399011-17402371 Setaria italica
Seita.7G070000 0.5kb downstream 0.5kb downstream 500 false scaffold_7: 17401872-17402371 Setaria italica
Seita.7G070000 1.0kb upstream 1.0kb upstream 3861 true scaffold_7: 17398011-17401871 Setaria italica
Seita.7G070000 1.0kb upstream 1.0kb upstream 1000 false scaffold_7: 17398011-17399010 Setaria italica
Seita.7G070000 1.0kb downstream 1.0kb downstream 3861 true scaffold_7: 17399011-17402871 Setaria italica
Seita.7G070000 1.0kb downstream 1.0kb downstream 1000 false scaffold_7: 17401872-17402871 Setaria italica
Seita.7G070000 2.0kb upstream 2.0kb upstream 4861 true scaffold_7: 17397011-17401871 Setaria italica
Seita.7G070000 2.0kb upstream 2.0kb upstream 2000 false scaffold_7: 17397011-17399010 Setaria italica
Seita.7G070000 2.0kb downstream 2.0kb downstream 4861 true scaffold_7: 17399011-17403871 Setaria italica
Seita.7G070000 2.0kb downstream 2.0kb downstream 2000 false scaffold_7: 17401872-17403871 Setaria italica
Seita.7G070000 5.0kb upstream 5.0kb upstream 7861 true scaffold_7: 17394011-17401871 Setaria italica
Seita.7G070000 5.0kb upstream 5.0kb upstream 5000 false scaffold_7: 17394011-17399010 Setaria italica
Seita.7G070000 5.0kb downstream 5.0kb downstream 7861 true scaffold_7: 17399011-17406871 Setaria italica
Seita.7G070000 5.0kb downstream 5.0kb downstream 5000 false scaffold_7: 17401872-17406871 Setaria italica
Seita.7G070000 10.0kb upstream 10.0kb upstream 12861 true scaffold_7: 17389011-17401871 Setaria italica
Seita.7G070000 10.0kb upstream 10.0kb upstream 10000 false scaffold_7: 17389011-17399010 Setaria italica
Seita.7G070000 10.0kb downstream 10.0kb downstream 12861 true scaffold_7: 17399011-17411871 Setaria italica
Seita.7G070000 10.0kb downstream 10.0kb downstream 10000 false scaffold_7: 17401872-17411871 Setaria italica

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122194671 5267 Panicoideae View MSA
124580428 5269 Grass View MSA
122047827 5273 Angiosperm View MSA
121351451 5274 Embryophyte View MSA
123428440 5275 Viridiplantae View MSA

20 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.138        
cufflinks 0.031     Low  
cufflinks 0.059     Low  
cufflinks 0.018     Low Low
cufflinks 0.007     Low Low
cufflinks 0.025     Low  
cufflinks 0.069     Low  
cufflinks 0.176        
cufflinks 0.013     Low Low
cufflinks 1.929       High
cufflinks 0.543        
cufflinks 0.887        
cufflinks 2.028       High
cufflinks 0.158        
cufflinks 2.459       High
cufflinks 0.05     Low  
cufflinks 4.568       High
cufflinks 0.049     Low  
cufflinks 0.076     Low  
cufflinks 1.108       High

0 Strain