Gene : Seita.7G149100 S. italica v2.2
Defline:  (1 of 1) PTHR11042:SF96 - SERINE/THREONINE-PROTEIN KINASE GCN2-RELATED Genomic Order:  1491
Name:  ? Seita.7G149100 Secondary Identifier:  ? PAC:32705522
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Seita.7G149100 0.5kb upstream 0.5kb upstream 17392 true scaffold_7: 23646887-23664278 Setaria italica
Seita.7G149100 0.5kb upstream 0.5kb upstream 500 false scaffold_7: 23646887-23647386 Setaria italica
Seita.7G149100 0.5kb downstream 0.5kb downstream 17392 true scaffold_7: 23647387-23664778 Setaria italica
Seita.7G149100 0.5kb downstream 0.5kb downstream 500 false scaffold_7: 23664279-23664778 Setaria italica
Seita.7G149100 1.0kb upstream 1.0kb upstream 17892 true scaffold_7: 23646387-23664278 Setaria italica
Seita.7G149100 1.0kb upstream 1.0kb upstream 1000 false scaffold_7: 23646387-23647386 Setaria italica
Seita.7G149100 1.0kb downstream 1.0kb downstream 17892 true scaffold_7: 23647387-23665278 Setaria italica
Seita.7G149100 1.0kb downstream 1.0kb downstream 1000 false scaffold_7: 23664279-23665278 Setaria italica
Seita.7G149100 2.0kb upstream 2.0kb upstream 18892 true scaffold_7: 23645387-23664278 Setaria italica
Seita.7G149100 2.0kb upstream 2.0kb upstream 2000 false scaffold_7: 23645387-23647386 Setaria italica
Seita.7G149100 2.0kb downstream 2.0kb downstream 18892 true scaffold_7: 23647387-23666278 Setaria italica
Seita.7G149100 2.0kb downstream 2.0kb downstream 2000 false scaffold_7: 23664279-23666278 Setaria italica
Seita.7G149100 5.0kb upstream 5.0kb upstream 21892 true scaffold_7: 23642387-23664278 Setaria italica
Seita.7G149100 5.0kb upstream 5.0kb upstream 5000 false scaffold_7: 23642387-23647386 Setaria italica
Seita.7G149100 5.0kb downstream 5.0kb downstream 21892 true scaffold_7: 23647387-23669278 Setaria italica
Seita.7G149100 5.0kb downstream 5.0kb downstream 5000 false scaffold_7: 23664279-23669278 Setaria italica
Seita.7G149100 10.0kb upstream 10.0kb upstream 26892 true scaffold_7: 23637387-23664278 Setaria italica
Seita.7G149100 10.0kb upstream 10.0kb upstream 10000 false scaffold_7: 23637387-23647386 Setaria italica
Seita.7G149100 10.0kb downstream 10.0kb downstream 26892 true scaffold_7: 23647387-23674278 Setaria italica
Seita.7G149100 10.0kb downstream 10.0kb downstream 10000 false scaffold_7: 23664279-23674278 Setaria italica

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122179697 5267 Panicoideae View MSA
124581465 5269 Grass View MSA
122046632 5273 Angiosperm View MSA
121347424 5274 Embryophyte View MSA
123427860 5275 Viridiplantae View MSA

20 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.419       High
cufflinks 1.009        
cufflinks 1.835       High
cufflinks 1.206        
cufflinks 0.832       Low
cufflinks 1.133        
cufflinks 1.022        
cufflinks 0.88       Low
cufflinks 1.039        
cufflinks 1.109        
cufflinks 1.65        
cufflinks 1.601        
cufflinks 1.585        
cufflinks 1.545        
cufflinks 1.453        
cufflinks 1.527        
cufflinks 1.411        
cufflinks 2.568       High
cufflinks 0.981        
cufflinks 1.165        

0 Strain