Gene : Seita.7G154600 S. italica v2.2
Defline:  (1 of 1) PTHR11076:SF35 - PROTEIN CHROMOSOME TRANSMISSION FIDELITY 7 Genomic Order:  1546
Name:  ? Seita.7G154600 Secondary Identifier:  ? PAC:32702221
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Seita.7G154600 0.5kb upstream 0.5kb upstream 4511 true scaffold_7: 23984739-23989249 Setaria italica
Seita.7G154600 0.5kb upstream 0.5kb upstream 500 false scaffold_7: 23988750-23989249 Setaria italica
Seita.7G154600 0.5kb downstream 0.5kb downstream 4511 true scaffold_7: 23984239-23988749 Setaria italica
Seita.7G154600 0.5kb downstream 0.5kb downstream 500 false scaffold_7: 23984239-23984738 Setaria italica
Seita.7G154600 1.0kb upstream 1.0kb upstream 5011 true scaffold_7: 23984739-23989749 Setaria italica
Seita.7G154600 1.0kb upstream 1.0kb upstream 1000 false scaffold_7: 23988750-23989749 Setaria italica
Seita.7G154600 1.0kb downstream 1.0kb downstream 5011 true scaffold_7: 23983739-23988749 Setaria italica
Seita.7G154600 1.0kb downstream 1.0kb downstream 1000 false scaffold_7: 23983739-23984738 Setaria italica
Seita.7G154600 2.0kb upstream 2.0kb upstream 6011 true scaffold_7: 23984739-23990749 Setaria italica
Seita.7G154600 2.0kb upstream 2.0kb upstream 2000 false scaffold_7: 23988750-23990749 Setaria italica
Seita.7G154600 2.0kb downstream 2.0kb downstream 6011 true scaffold_7: 23982739-23988749 Setaria italica
Seita.7G154600 2.0kb downstream 2.0kb downstream 2000 false scaffold_7: 23982739-23984738 Setaria italica
Seita.7G154600 5.0kb upstream 5.0kb upstream 9011 true scaffold_7: 23984739-23993749 Setaria italica
Seita.7G154600 5.0kb upstream 5.0kb upstream 5000 false scaffold_7: 23988750-23993749 Setaria italica
Seita.7G154600 5.0kb downstream 5.0kb downstream 9011 true scaffold_7: 23979739-23988749 Setaria italica
Seita.7G154600 5.0kb downstream 5.0kb downstream 5000 false scaffold_7: 23979739-23984738 Setaria italica
Seita.7G154600 10.0kb upstream 10.0kb upstream 14011 true scaffold_7: 23984739-23998749 Setaria italica
Seita.7G154600 10.0kb upstream 10.0kb upstream 10000 false scaffold_7: 23988750-23998749 Setaria italica
Seita.7G154600 10.0kb downstream 10.0kb downstream 14011 true scaffold_7: 23974739-23988749 Setaria italica
Seita.7G154600 10.0kb downstream 10.0kb downstream 10000 false scaffold_7: 23974739-23984738 Setaria italica

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122182540 5267 Panicoideae View MSA
124585107 5269 Grass View MSA
122046028 5273 Angiosperm View MSA
121348225 5274 Embryophyte View MSA
123425872 5275 Viridiplantae View MSA

20 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.271        
cufflinks 0.557       High
cufflinks 0.028     Low Low
cufflinks 0.044     Low Low
cufflinks 0.022     Low Low
cufflinks 0.553       High
cufflinks 0.208        
cufflinks 0.293        
cufflinks 0.168        
cufflinks 0.377        
cufflinks 0.359        
cufflinks 0.259        
cufflinks 0.284        
cufflinks 0.089     Low  
cufflinks 0.488       High
cufflinks 0.099     Low  
cufflinks 0.384        
cufflinks 0.16        
cufflinks 0.045     Low Low
cufflinks 0.375        

0 Strain