Gene : Seita.7G157500 S. italica v2.2
Defline:  (1 of 1406) 2.7.11.1 - Non-specific serine/threonine protein kinase / Threonine-specific protein kinase Genomic Order:  1575
Name:  ? Seita.7G157500 Secondary Identifier:  ? PAC:32703616
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Seita.7G157500 0.5kb upstream 0.5kb upstream 5108 true scaffold_7: 24226759-24231866 Setaria italica
Seita.7G157500 0.5kb upstream 0.5kb upstream 500 false scaffold_7: 24226759-24227258 Setaria italica
Seita.7G157500 0.5kb downstream 0.5kb downstream 5108 true scaffold_7: 24227259-24232366 Setaria italica
Seita.7G157500 0.5kb downstream 0.5kb downstream 500 false scaffold_7: 24231867-24232366 Setaria italica
Seita.7G157500 1.0kb upstream 1.0kb upstream 5608 true scaffold_7: 24226259-24231866 Setaria italica
Seita.7G157500 1.0kb upstream 1.0kb upstream 1000 false scaffold_7: 24226259-24227258 Setaria italica
Seita.7G157500 1.0kb downstream 1.0kb downstream 5608 true scaffold_7: 24227259-24232866 Setaria italica
Seita.7G157500 1.0kb downstream 1.0kb downstream 1000 false scaffold_7: 24231867-24232866 Setaria italica
Seita.7G157500 2.0kb upstream 2.0kb upstream 6608 true scaffold_7: 24225259-24231866 Setaria italica
Seita.7G157500 2.0kb upstream 2.0kb upstream 2000 false scaffold_7: 24225259-24227258 Setaria italica
Seita.7G157500 2.0kb downstream 2.0kb downstream 6608 true scaffold_7: 24227259-24233866 Setaria italica
Seita.7G157500 2.0kb downstream 2.0kb downstream 2000 false scaffold_7: 24231867-24233866 Setaria italica
Seita.7G157500 5.0kb upstream 5.0kb upstream 9608 true scaffold_7: 24222259-24231866 Setaria italica
Seita.7G157500 5.0kb upstream 5.0kb upstream 5000 false scaffold_7: 24222259-24227258 Setaria italica
Seita.7G157500 5.0kb downstream 5.0kb downstream 9608 true scaffold_7: 24227259-24236866 Setaria italica
Seita.7G157500 5.0kb downstream 5.0kb downstream 5000 false scaffold_7: 24231867-24236866 Setaria italica
Seita.7G157500 10.0kb upstream 10.0kb upstream 14608 true scaffold_7: 24217259-24231866 Setaria italica
Seita.7G157500 10.0kb upstream 10.0kb upstream 10000 false scaffold_7: 24217259-24227258 Setaria italica
Seita.7G157500 10.0kb downstream 10.0kb downstream 14608 true scaffold_7: 24227259-24241866 Setaria italica
Seita.7G157500 10.0kb downstream 10.0kb downstream 10000 false scaffold_7: 24231867-24241866 Setaria italica

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122183838 5267 Panicoideae View MSA
124581515 5269 Grass View MSA
122051021 5273 Angiosperm View MSA
123429169 5275 Viridiplantae View MSA
121351551 5274 Embryophyte View MSA

20 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 10.728        
cufflinks 3.14       Low
cufflinks 10.719        
cufflinks 11.487     High  
cufflinks 14.908     High High
cufflinks 3.503       Low
cufflinks 9.351        
cufflinks 8.668        
cufflinks 13.535     High  
cufflinks 5.878        
cufflinks 6.781        
cufflinks 12.918        
cufflinks 8.522        
cufflinks 20.922     High High
cufflinks 11.81        
cufflinks 4.377       Low
cufflinks 10.59        
cufflinks 5.673        
cufflinks 11.1        
cufflinks 11.693        

0 Strain