Gene : Seita.7G158900 S. italica v2.2
Defline:  (1 of 1) PTHR24420//PTHR24420:SF487 - LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE // SUBFAMILY NOT NAMED Genomic Order:  1589
Name:  ? Seita.7G158900 Secondary Identifier:  ? PAC:32705948
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Seita.7G158900 0.5kb upstream 0.5kb upstream 2426 true scaffold_7: 24336810-24339235 Setaria italica
Seita.7G158900 0.5kb upstream 0.5kb upstream 500 false scaffold_7: 24336810-24337309 Setaria italica
Seita.7G158900 0.5kb downstream 0.5kb downstream 2426 true scaffold_7: 24337310-24339735 Setaria italica
Seita.7G158900 0.5kb downstream 0.5kb downstream 500 false scaffold_7: 24339236-24339735 Setaria italica
Seita.7G158900 1.0kb upstream 1.0kb upstream 2926 true scaffold_7: 24336310-24339235 Setaria italica
Seita.7G158900 1.0kb upstream 1.0kb upstream 1000 false scaffold_7: 24336310-24337309 Setaria italica
Seita.7G158900 1.0kb downstream 1.0kb downstream 2926 true scaffold_7: 24337310-24340235 Setaria italica
Seita.7G158900 1.0kb downstream 1.0kb downstream 1000 false scaffold_7: 24339236-24340235 Setaria italica
Seita.7G158900 2.0kb upstream 2.0kb upstream 3926 true scaffold_7: 24335310-24339235 Setaria italica
Seita.7G158900 2.0kb upstream 2.0kb upstream 2000 false scaffold_7: 24335310-24337309 Setaria italica
Seita.7G158900 2.0kb downstream 2.0kb downstream 3926 true scaffold_7: 24337310-24341235 Setaria italica
Seita.7G158900 2.0kb downstream 2.0kb downstream 2000 false scaffold_7: 24339236-24341235 Setaria italica
Seita.7G158900 5.0kb upstream 5.0kb upstream 6926 true scaffold_7: 24332310-24339235 Setaria italica
Seita.7G158900 5.0kb upstream 5.0kb upstream 5000 false scaffold_7: 24332310-24337309 Setaria italica
Seita.7G158900 5.0kb downstream 5.0kb downstream 6926 true scaffold_7: 24337310-24344235 Setaria italica
Seita.7G158900 5.0kb downstream 5.0kb downstream 5000 false scaffold_7: 24339236-24344235 Setaria italica
Seita.7G158900 10.0kb upstream 10.0kb upstream 11926 true scaffold_7: 24327310-24339235 Setaria italica
Seita.7G158900 10.0kb upstream 10.0kb upstream 10000 false scaffold_7: 24327310-24337309 Setaria italica
Seita.7G158900 10.0kb downstream 10.0kb downstream 11926 true scaffold_7: 24337310-24349235 Setaria italica
Seita.7G158900 10.0kb downstream 10.0kb downstream 10000 false scaffold_7: 24339236-24349235 Setaria italica

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122196005 5267 Panicoideae View MSA
124590516 5269 Grass View MSA
122042283 5273 Angiosperm View MSA
121309946 5274 Embryophyte View MSA
123347571 5275 Viridiplantae View MSA

20 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.226        
cufflinks 42.315     High High
cufflinks 0.01     Low Low
cufflinks 0.012     Low Low
cufflinks 0.593        
cufflinks 62.807     High High
cufflinks 6.762        
cufflinks 4.631        
cufflinks 7.931        
cufflinks 10.727        
cufflinks 6.028        
cufflinks 1.63        
cufflinks 7.343        
cufflinks 0.028     Low Low
cufflinks 4.227        
cufflinks 1.467        
cufflinks 2.464        
cufflinks 0.44        
cufflinks 0.191        
cufflinks 6.979        

0 Strain