Gene : Seita.7G162000 S. italica v2.2
Defline:  (1 of 2) PTHR23180//PTHR23180:SF243 - CENTAURIN/ARF Genomic Order:  1620
Name:  ? Seita.7G162000 Secondary Identifier:  ? PAC:32702310
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Seita.7G162000 0.5kb upstream 0.5kb upstream 8978 true scaffold_7: 24562875-24571852 Setaria italica
Seita.7G162000 0.5kb upstream 0.5kb upstream 500 false scaffold_7: 24562875-24563374 Setaria italica
Seita.7G162000 0.5kb downstream 0.5kb downstream 8978 true scaffold_7: 24563375-24572352 Setaria italica
Seita.7G162000 0.5kb downstream 0.5kb downstream 500 false scaffold_7: 24571853-24572352 Setaria italica
Seita.7G162000 1.0kb upstream 1.0kb upstream 9478 true scaffold_7: 24562375-24571852 Setaria italica
Seita.7G162000 1.0kb upstream 1.0kb upstream 1000 false scaffold_7: 24562375-24563374 Setaria italica
Seita.7G162000 1.0kb downstream 1.0kb downstream 9478 true scaffold_7: 24563375-24572852 Setaria italica
Seita.7G162000 1.0kb downstream 1.0kb downstream 1000 false scaffold_7: 24571853-24572852 Setaria italica
Seita.7G162000 2.0kb upstream 2.0kb upstream 10478 true scaffold_7: 24561375-24571852 Setaria italica
Seita.7G162000 2.0kb upstream 2.0kb upstream 2000 false scaffold_7: 24561375-24563374 Setaria italica
Seita.7G162000 2.0kb downstream 2.0kb downstream 10478 true scaffold_7: 24563375-24573852 Setaria italica
Seita.7G162000 2.0kb downstream 2.0kb downstream 2000 false scaffold_7: 24571853-24573852 Setaria italica
Seita.7G162000 5.0kb upstream 5.0kb upstream 13478 true scaffold_7: 24558375-24571852 Setaria italica
Seita.7G162000 5.0kb upstream 5.0kb upstream 5000 false scaffold_7: 24558375-24563374 Setaria italica
Seita.7G162000 5.0kb downstream 5.0kb downstream 13478 true scaffold_7: 24563375-24576852 Setaria italica
Seita.7G162000 5.0kb downstream 5.0kb downstream 5000 false scaffold_7: 24571853-24576852 Setaria italica
Seita.7G162000 10.0kb upstream 10.0kb upstream 18478 true scaffold_7: 24553375-24571852 Setaria italica
Seita.7G162000 10.0kb upstream 10.0kb upstream 10000 false scaffold_7: 24553375-24563374 Setaria italica
Seita.7G162000 10.0kb downstream 10.0kb downstream 18478 true scaffold_7: 24563375-24581852 Setaria italica
Seita.7G162000 10.0kb downstream 10.0kb downstream 10000 false scaffold_7: 24571853-24581852 Setaria italica

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122181618 5267 Panicoideae View MSA
124568585 5269 Grass View MSA
122043769 5273 Angiosperm View MSA
121350086 5274 Embryophyte View MSA
123428676 5275 Viridiplantae View MSA

20 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.735        
cufflinks 2.065        
cufflinks 20.699     High High
cufflinks 19.938     High High
cufflinks 13.455     High  
cufflinks 2.27        
cufflinks 7.583        
cufflinks 8.398        
cufflinks 7.212        
cufflinks 1.433        
cufflinks 2.665        
cufflinks 0.531       Low
cufflinks 0.828       Low
cufflinks 9.578        
cufflinks 0.555       Low
cufflinks 16.064     High High
cufflinks 0.773       Low
cufflinks 10.791        
cufflinks 14.567     High High
cufflinks 0.648       Low

0 Strain