Gene : Seita.7G162500 S. italica v2.2
Defline:  (1 of 1) PTHR24031:SF91 - ATP-DEPENDENT RNA HELICASE DDX24 Genomic Order:  1625
Name:  ? Seita.7G162500 Secondary Identifier:  ? PAC:32702351
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Seita.7G162500 0.5kb upstream 0.5kb upstream 7881 true scaffold_7: 24618698-24626578 Setaria italica
Seita.7G162500 0.5kb upstream 0.5kb upstream 500 false scaffold_7: 24626079-24626578 Setaria italica
Seita.7G162500 0.5kb downstream 0.5kb downstream 7881 true scaffold_7: 24618198-24626078 Setaria italica
Seita.7G162500 0.5kb downstream 0.5kb downstream 500 false scaffold_7: 24618198-24618697 Setaria italica
Seita.7G162500 1.0kb upstream 1.0kb upstream 8381 true scaffold_7: 24618698-24627078 Setaria italica
Seita.7G162500 1.0kb upstream 1.0kb upstream 1000 false scaffold_7: 24626079-24627078 Setaria italica
Seita.7G162500 1.0kb downstream 1.0kb downstream 8381 true scaffold_7: 24617698-24626078 Setaria italica
Seita.7G162500 1.0kb downstream 1.0kb downstream 1000 false scaffold_7: 24617698-24618697 Setaria italica
Seita.7G162500 2.0kb upstream 2.0kb upstream 9381 true scaffold_7: 24618698-24628078 Setaria italica
Seita.7G162500 2.0kb upstream 2.0kb upstream 2000 false scaffold_7: 24626079-24628078 Setaria italica
Seita.7G162500 2.0kb downstream 2.0kb downstream 9381 true scaffold_7: 24616698-24626078 Setaria italica
Seita.7G162500 2.0kb downstream 2.0kb downstream 2000 false scaffold_7: 24616698-24618697 Setaria italica
Seita.7G162500 5.0kb upstream 5.0kb upstream 12381 true scaffold_7: 24618698-24631078 Setaria italica
Seita.7G162500 5.0kb upstream 5.0kb upstream 5000 false scaffold_7: 24626079-24631078 Setaria italica
Seita.7G162500 5.0kb downstream 5.0kb downstream 12381 true scaffold_7: 24613698-24626078 Setaria italica
Seita.7G162500 5.0kb downstream 5.0kb downstream 5000 false scaffold_7: 24613698-24618697 Setaria italica
Seita.7G162500 10.0kb upstream 10.0kb upstream 17381 true scaffold_7: 24618698-24636078 Setaria italica
Seita.7G162500 10.0kb upstream 10.0kb upstream 10000 false scaffold_7: 24626079-24636078 Setaria italica
Seita.7G162500 10.0kb downstream 10.0kb downstream 17381 true scaffold_7: 24608698-24626078 Setaria italica
Seita.7G162500 10.0kb downstream 10.0kb downstream 10000 false scaffold_7: 24608698-24618697 Setaria italica

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041287 5273 Angiosperm View MSA
122188785 5267 Panicoideae View MSA
124584454 5269 Grass View MSA
121349262 5274 Embryophyte View MSA
123425177 5275 Viridiplantae View MSA

20 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.001        
cufflinks 9.669       High
cufflinks 2.614        
cufflinks 1.269       Low
cufflinks 2.558       Low
cufflinks 7.937       High
cufflinks 4.271        
cufflinks 4.392        
cufflinks 6.647        
cufflinks 3.561        
cufflinks 5.949        
cufflinks 6.099        
cufflinks 3.175        
cufflinks 4.734        
cufflinks 7.593       High
cufflinks 3.154        
cufflinks 5.909        
cufflinks 4.45        
cufflinks 1.902       Low
cufflinks 6.551        

0 Strain