Gene : Seita.7G167000 S. italica v2.2
Defline:  (1 of 3) 4.1.2.5 - L-threonine aldolase / L-threonine acetaldehyde-lyase Genomic Order:  1670
Name:  ? Seita.7G167000 Secondary Identifier:  ? PAC:32703877
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Seita.7G167000 0.5kb upstream 0.5kb upstream 4901 true scaffold_7: 24906753-24911653 Setaria italica
Seita.7G167000 0.5kb upstream 0.5kb upstream 500 false scaffold_7: 24911154-24911653 Setaria italica
Seita.7G167000 0.5kb downstream 0.5kb downstream 4901 true scaffold_7: 24906253-24911153 Setaria italica
Seita.7G167000 0.5kb downstream 0.5kb downstream 500 false scaffold_7: 24906253-24906752 Setaria italica
Seita.7G167000 1.0kb upstream 1.0kb upstream 5401 true scaffold_7: 24906753-24912153 Setaria italica
Seita.7G167000 1.0kb upstream 1.0kb upstream 1000 false scaffold_7: 24911154-24912153 Setaria italica
Seita.7G167000 1.0kb downstream 1.0kb downstream 5401 true scaffold_7: 24905753-24911153 Setaria italica
Seita.7G167000 1.0kb downstream 1.0kb downstream 1000 false scaffold_7: 24905753-24906752 Setaria italica
Seita.7G167000 2.0kb upstream 2.0kb upstream 6401 true scaffold_7: 24906753-24913153 Setaria italica
Seita.7G167000 2.0kb upstream 2.0kb upstream 2000 false scaffold_7: 24911154-24913153 Setaria italica
Seita.7G167000 2.0kb downstream 2.0kb downstream 6401 true scaffold_7: 24904753-24911153 Setaria italica
Seita.7G167000 2.0kb downstream 2.0kb downstream 2000 false scaffold_7: 24904753-24906752 Setaria italica
Seita.7G167000 5.0kb upstream 5.0kb upstream 9401 true scaffold_7: 24906753-24916153 Setaria italica
Seita.7G167000 5.0kb upstream 5.0kb upstream 5000 false scaffold_7: 24911154-24916153 Setaria italica
Seita.7G167000 5.0kb downstream 5.0kb downstream 9401 true scaffold_7: 24901753-24911153 Setaria italica
Seita.7G167000 5.0kb downstream 5.0kb downstream 5000 false scaffold_7: 24901753-24906752 Setaria italica
Seita.7G167000 10.0kb upstream 10.0kb upstream 14401 true scaffold_7: 24906753-24921153 Setaria italica
Seita.7G167000 10.0kb upstream 10.0kb upstream 10000 false scaffold_7: 24911154-24921153 Setaria italica
Seita.7G167000 10.0kb downstream 10.0kb downstream 14401 true scaffold_7: 24896753-24911153 Setaria italica
Seita.7G167000 10.0kb downstream 10.0kb downstream 10000 false scaffold_7: 24896753-24906752 Setaria italica

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122185624 5267 Panicoideae View MSA
124570441 5269 Grass View MSA
122044905 5273 Angiosperm View MSA
121345445 5274 Embryophyte View MSA
123424169 5275 Viridiplantae View MSA

20 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 12.557        
cufflinks 3.026        
cufflinks 8.918        
cufflinks 15.587     High  
cufflinks 16.68     High  
cufflinks 2.687        
cufflinks 7.352        
cufflinks 20.227     High  
cufflinks 16.737     High  
cufflinks 7.928        
cufflinks 7.351        
cufflinks 13.562        
cufflinks 6.089        
cufflinks 11.81        
cufflinks 0.374       Low
cufflinks 19.839     High  
cufflinks 1.879        
cufflinks 64.212     High High
cufflinks 22.647     High  
cufflinks 0.087     Low Low

0 Strain