Gene : Seita.7G169900 S. italica v2.2
Defline:  (1 of 123) PF07762 - Protein of unknown function (DUF1618) (DUF1618) Genomic Order:  1699
Name:  ? Seita.7G169900 Secondary Identifier:  ? PAC:32703820
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Seita.7G169900 0.5kb upstream 0.5kb upstream 2742 true scaffold_7: 25168440-25171181 Setaria italica
Seita.7G169900 0.5kb upstream 0.5kb upstream 500 false scaffold_7: 25170682-25171181 Setaria italica
Seita.7G169900 0.5kb downstream 0.5kb downstream 2742 true scaffold_7: 25167940-25170681 Setaria italica
Seita.7G169900 0.5kb downstream 0.5kb downstream 500 false scaffold_7: 25167940-25168439 Setaria italica
Seita.7G169900 1.0kb upstream 1.0kb upstream 3242 true scaffold_7: 25168440-25171681 Setaria italica
Seita.7G169900 1.0kb upstream 1.0kb upstream 1000 false scaffold_7: 25170682-25171681 Setaria italica
Seita.7G169900 1.0kb downstream 1.0kb downstream 3242 true scaffold_7: 25167440-25170681 Setaria italica
Seita.7G169900 1.0kb downstream 1.0kb downstream 1000 false scaffold_7: 25167440-25168439 Setaria italica
Seita.7G169900 2.0kb upstream 2.0kb upstream 4242 true scaffold_7: 25168440-25172681 Setaria italica
Seita.7G169900 2.0kb upstream 2.0kb upstream 2000 false scaffold_7: 25170682-25172681 Setaria italica
Seita.7G169900 2.0kb downstream 2.0kb downstream 4242 true scaffold_7: 25166440-25170681 Setaria italica
Seita.7G169900 2.0kb downstream 2.0kb downstream 2000 false scaffold_7: 25166440-25168439 Setaria italica
Seita.7G169900 5.0kb upstream 5.0kb upstream 7242 true scaffold_7: 25168440-25175681 Setaria italica
Seita.7G169900 5.0kb upstream 5.0kb upstream 5000 false scaffold_7: 25170682-25175681 Setaria italica
Seita.7G169900 5.0kb downstream 5.0kb downstream 7242 true scaffold_7: 25163440-25170681 Setaria italica
Seita.7G169900 5.0kb downstream 5.0kb downstream 5000 false scaffold_7: 25163440-25168439 Setaria italica
Seita.7G169900 10.0kb upstream 10.0kb upstream 12242 true scaffold_7: 25168440-25180681 Setaria italica
Seita.7G169900 10.0kb upstream 10.0kb upstream 10000 false scaffold_7: 25170682-25180681 Setaria italica
Seita.7G169900 10.0kb downstream 10.0kb downstream 12242 true scaffold_7: 25158440-25170681 Setaria italica
Seita.7G169900 10.0kb downstream 10.0kb downstream 10000 false scaffold_7: 25158440-25168439 Setaria italica

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121994770 5273 Angiosperm View MSA
122199307 5267 Panicoideae View MSA
124585583 5269 Grass View MSA
121264986 5274 Embryophyte View MSA
123303402 5275 Viridiplantae View MSA

20 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.071     Low High
cufflinks 0.116     Low High
cufflinks 0.036     Low  
cufflinks 0.011     Low  
cufflinks 0.016     Low  
cufflinks 0.121     Low High
cufflinks 0.031     Low  
cufflinks 0.019     Low  
cufflinks 0.007     Low Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.006     Low Low
cufflinks 0.03     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.011     Low  
cufflinks 0.02     Low  
cufflinks 0.027     Low  
cufflinks 0.057     Low  
cufflinks 0.027     Low  
cufflinks 0.051     Low  
cufflinks 0.015     Low  

0 Strain