Gene : Seita.7G177700 S. italica v2.2
Genomic Order:  1777 Name:  ? Seita.7G177700
Secondary Identifier:  ? PAC:32703621
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Seita.7G177700 0.5kb upstream 0.5kb upstream 3908 true scaffold_7: 25693723-25697630 Setaria italica
Seita.7G177700 0.5kb upstream 0.5kb upstream 500 false scaffold_7: 25697131-25697630 Setaria italica
Seita.7G177700 0.5kb downstream 0.5kb downstream 3908 true scaffold_7: 25693223-25697130 Setaria italica
Seita.7G177700 0.5kb downstream 0.5kb downstream 500 false scaffold_7: 25693223-25693722 Setaria italica
Seita.7G177700 1.0kb upstream 1.0kb upstream 4408 true scaffold_7: 25693723-25698130 Setaria italica
Seita.7G177700 1.0kb upstream 1.0kb upstream 1000 false scaffold_7: 25697131-25698130 Setaria italica
Seita.7G177700 1.0kb downstream 1.0kb downstream 4408 true scaffold_7: 25692723-25697130 Setaria italica
Seita.7G177700 1.0kb downstream 1.0kb downstream 1000 false scaffold_7: 25692723-25693722 Setaria italica
Seita.7G177700 2.0kb upstream 2.0kb upstream 5408 true scaffold_7: 25693723-25699130 Setaria italica
Seita.7G177700 2.0kb upstream 2.0kb upstream 2000 false scaffold_7: 25697131-25699130 Setaria italica
Seita.7G177700 2.0kb downstream 2.0kb downstream 5408 true scaffold_7: 25691723-25697130 Setaria italica
Seita.7G177700 2.0kb downstream 2.0kb downstream 2000 false scaffold_7: 25691723-25693722 Setaria italica
Seita.7G177700 5.0kb upstream 5.0kb upstream 8408 true scaffold_7: 25693723-25702130 Setaria italica
Seita.7G177700 5.0kb upstream 5.0kb upstream 5000 false scaffold_7: 25697131-25702130 Setaria italica
Seita.7G177700 5.0kb downstream 5.0kb downstream 8408 true scaffold_7: 25688723-25697130 Setaria italica
Seita.7G177700 5.0kb downstream 5.0kb downstream 5000 false scaffold_7: 25688723-25693722 Setaria italica
Seita.7G177700 10.0kb upstream 10.0kb upstream 13408 true scaffold_7: 25693723-25707130 Setaria italica
Seita.7G177700 10.0kb upstream 10.0kb upstream 10000 false scaffold_7: 25697131-25707130 Setaria italica
Seita.7G177700 10.0kb downstream 10.0kb downstream 13408 true scaffold_7: 25683723-25697130 Setaria italica
Seita.7G177700 10.0kb downstream 10.0kb downstream 10000 false scaffold_7: 25683723-25693722 Setaria italica

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041445 5273 Angiosperm View MSA
122189340 5267 Panicoideae View MSA
124580447 5269 Grass View MSA
121345891 5274 Embryophyte View MSA
123428048 5275 Viridiplantae View MSA

20 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.637        
cufflinks 3.502       High
cufflinks 1.459       Low
cufflinks 2.192        
cufflinks 1.582       Low
cufflinks 4.117       High
cufflinks 1.725        
cufflinks 2.824        
cufflinks 2.051        
cufflinks 2.03        
cufflinks 1.918        
cufflinks 3.499       High
cufflinks 2.213        
cufflinks 1.904        
cufflinks 2.977        
cufflinks 1.619       Low
cufflinks 3.585       High
cufflinks 3.136        
cufflinks 1.637       Low
cufflinks 2.951        

0 Strain