Gene : Seita.7G181500 S. italica v2.2
Defline:  (1 of 135) PF02365 - No apical meristem (NAM) protein (NAM) Genomic Order:  1815
Name:  ? Seita.7G181500 Secondary Identifier:  ? PAC:32701968
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Seita.7G181500 0.5kb upstream 0.5kb upstream 6003 true scaffold_7: 25950366-25956368 Setaria italica
Seita.7G181500 0.5kb upstream 0.5kb upstream 500 false scaffold_7: 25955869-25956368 Setaria italica
Seita.7G181500 0.5kb downstream 0.5kb downstream 6003 true scaffold_7: 25949866-25955868 Setaria italica
Seita.7G181500 0.5kb downstream 0.5kb downstream 500 false scaffold_7: 25949866-25950365 Setaria italica
Seita.7G181500 1.0kb upstream 1.0kb upstream 6503 true scaffold_7: 25950366-25956868 Setaria italica
Seita.7G181500 1.0kb upstream 1.0kb upstream 1000 false scaffold_7: 25955869-25956868 Setaria italica
Seita.7G181500 1.0kb downstream 1.0kb downstream 6503 true scaffold_7: 25949366-25955868 Setaria italica
Seita.7G181500 1.0kb downstream 1.0kb downstream 1000 false scaffold_7: 25949366-25950365 Setaria italica
Seita.7G181500 2.0kb upstream 2.0kb upstream 7503 true scaffold_7: 25950366-25957868 Setaria italica
Seita.7G181500 2.0kb upstream 2.0kb upstream 2000 false scaffold_7: 25955869-25957868 Setaria italica
Seita.7G181500 2.0kb downstream 2.0kb downstream 7503 true scaffold_7: 25948366-25955868 Setaria italica
Seita.7G181500 2.0kb downstream 2.0kb downstream 2000 false scaffold_7: 25948366-25950365 Setaria italica
Seita.7G181500 5.0kb upstream 5.0kb upstream 10503 true scaffold_7: 25950366-25960868 Setaria italica
Seita.7G181500 5.0kb upstream 5.0kb upstream 5000 false scaffold_7: 25955869-25960868 Setaria italica
Seita.7G181500 5.0kb downstream 5.0kb downstream 10503 true scaffold_7: 25945366-25955868 Setaria italica
Seita.7G181500 5.0kb downstream 5.0kb downstream 5000 false scaffold_7: 25945366-25950365 Setaria italica
Seita.7G181500 10.0kb upstream 10.0kb upstream 15503 true scaffold_7: 25950366-25965868 Setaria italica
Seita.7G181500 10.0kb upstream 10.0kb upstream 10000 false scaffold_7: 25955869-25965868 Setaria italica
Seita.7G181500 10.0kb downstream 10.0kb downstream 15503 true scaffold_7: 25940366-25955868 Setaria italica
Seita.7G181500 10.0kb downstream 10.0kb downstream 10000 false scaffold_7: 25940366-25950365 Setaria italica

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122045953 5273 Angiosperm View MSA
122189137 5267 Panicoideae View MSA
124586215 5269 Grass View MSA
121351431 5274 Embryophyte View MSA
123382163 5275 Viridiplantae View MSA

20 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.168        
cufflinks 0.589        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.347        
cufflinks 0.934        
cufflinks 1.112        
cufflinks 0.592        
cufflinks 2.074        
cufflinks 0.577        
cufflinks 1.054        
cufflinks 0.85        
cufflinks 1.554        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.756        
cufflinks 0.477        
cufflinks 0.839        
cufflinks 0.642        
cufflinks 0.005     Low Low
cufflinks 1.103        

0 Strain