Gene : Seita.7G180100 S. italica v2.2
Defline:  (1 of 2) PTHR10106//PTHR10106:SF17 - CYTOCHROME B561-RELATED Genomic Order:  1801
Name:  ? Seita.7G180100 Secondary Identifier:  ? PAC:32702585
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Seita.7G180100 0.5kb upstream 0.5kb upstream 4087 true scaffold_7: 25868092-25872178 Setaria italica
Seita.7G180100 0.5kb upstream 0.5kb upstream 500 false scaffold_7: 25871679-25872178 Setaria italica
Seita.7G180100 0.5kb downstream 0.5kb downstream 4087 true scaffold_7: 25867592-25871678 Setaria italica
Seita.7G180100 0.5kb downstream 0.5kb downstream 500 false scaffold_7: 25867592-25868091 Setaria italica
Seita.7G180100 1.0kb upstream 1.0kb upstream 4587 true scaffold_7: 25868092-25872678 Setaria italica
Seita.7G180100 1.0kb upstream 1.0kb upstream 1000 false scaffold_7: 25871679-25872678 Setaria italica
Seita.7G180100 1.0kb downstream 1.0kb downstream 4587 true scaffold_7: 25867092-25871678 Setaria italica
Seita.7G180100 1.0kb downstream 1.0kb downstream 1000 false scaffold_7: 25867092-25868091 Setaria italica
Seita.7G180100 2.0kb upstream 2.0kb upstream 5587 true scaffold_7: 25868092-25873678 Setaria italica
Seita.7G180100 2.0kb upstream 2.0kb upstream 2000 false scaffold_7: 25871679-25873678 Setaria italica
Seita.7G180100 2.0kb downstream 2.0kb downstream 5587 true scaffold_7: 25866092-25871678 Setaria italica
Seita.7G180100 2.0kb downstream 2.0kb downstream 2000 false scaffold_7: 25866092-25868091 Setaria italica
Seita.7G180100 5.0kb upstream 5.0kb upstream 8587 true scaffold_7: 25868092-25876678 Setaria italica
Seita.7G180100 5.0kb upstream 5.0kb upstream 5000 false scaffold_7: 25871679-25876678 Setaria italica
Seita.7G180100 5.0kb downstream 5.0kb downstream 8587 true scaffold_7: 25863092-25871678 Setaria italica
Seita.7G180100 5.0kb downstream 5.0kb downstream 5000 false scaffold_7: 25863092-25868091 Setaria italica
Seita.7G180100 10.0kb upstream 10.0kb upstream 13587 true scaffold_7: 25868092-25881678 Setaria italica
Seita.7G180100 10.0kb upstream 10.0kb upstream 10000 false scaffold_7: 25871679-25881678 Setaria italica
Seita.7G180100 10.0kb downstream 10.0kb downstream 13587 true scaffold_7: 25858092-25871678 Setaria italica
Seita.7G180100 10.0kb downstream 10.0kb downstream 10000 false scaffold_7: 25858092-25868091 Setaria italica

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122179898 5267 Panicoideae View MSA
124579837 5269 Grass View MSA
122048765 5273 Angiosperm View MSA
123429174 5275 Viridiplantae View MSA
121350477 5274 Embryophyte View MSA

20 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.915        
cufflinks 3.632        
cufflinks 0.316       Low
cufflinks 0.479       Low
cufflinks 0.742        
cufflinks 2.405        
cufflinks 1.161        
cufflinks 3.761        
cufflinks 1.982        
cufflinks 6.901       High
cufflinks 2.377        
cufflinks 4.063        
cufflinks 10.053       High
cufflinks 1.292        
cufflinks 5.37        
cufflinks 0.943        
cufflinks 6.877       High
cufflinks 0.224       Low
cufflinks 1.127        
cufflinks 8.271       High

0 Strain