Gene : Seita.7G180900 S. italica v2.2
Genomic Order:  1809 Name:  ? Seita.7G180900
Secondary Identifier:  ? PAC:32704225
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Seita.7G180900 0.5kb upstream 0.5kb upstream 3185 true scaffold_7: 25904041-25907225 Setaria italica
Seita.7G180900 0.5kb upstream 0.5kb upstream 500 false scaffold_7: 25906726-25907225 Setaria italica
Seita.7G180900 0.5kb downstream 0.5kb downstream 3185 true scaffold_7: 25903541-25906725 Setaria italica
Seita.7G180900 0.5kb downstream 0.5kb downstream 500 false scaffold_7: 25903541-25904040 Setaria italica
Seita.7G180900 1.0kb upstream 1.0kb upstream 3685 true scaffold_7: 25904041-25907725 Setaria italica
Seita.7G180900 1.0kb upstream 1.0kb upstream 1000 false scaffold_7: 25906726-25907725 Setaria italica
Seita.7G180900 1.0kb downstream 1.0kb downstream 3685 true scaffold_7: 25903041-25906725 Setaria italica
Seita.7G180900 1.0kb downstream 1.0kb downstream 1000 false scaffold_7: 25903041-25904040 Setaria italica
Seita.7G180900 2.0kb upstream 2.0kb upstream 4685 true scaffold_7: 25904041-25908725 Setaria italica
Seita.7G180900 2.0kb upstream 2.0kb upstream 2000 false scaffold_7: 25906726-25908725 Setaria italica
Seita.7G180900 2.0kb downstream 2.0kb downstream 4685 true scaffold_7: 25902041-25906725 Setaria italica
Seita.7G180900 2.0kb downstream 2.0kb downstream 2000 false scaffold_7: 25902041-25904040 Setaria italica
Seita.7G180900 5.0kb upstream 5.0kb upstream 7685 true scaffold_7: 25904041-25911725 Setaria italica
Seita.7G180900 5.0kb upstream 5.0kb upstream 5000 false scaffold_7: 25906726-25911725 Setaria italica
Seita.7G180900 5.0kb downstream 5.0kb downstream 7685 true scaffold_7: 25899041-25906725 Setaria italica
Seita.7G180900 5.0kb downstream 5.0kb downstream 5000 false scaffold_7: 25899041-25904040 Setaria italica
Seita.7G180900 10.0kb upstream 10.0kb upstream 12685 true scaffold_7: 25904041-25916725 Setaria italica
Seita.7G180900 10.0kb upstream 10.0kb upstream 10000 false scaffold_7: 25906726-25916725 Setaria italica
Seita.7G180900 10.0kb downstream 10.0kb downstream 12685 true scaffold_7: 25894041-25906725 Setaria italica
Seita.7G180900 10.0kb downstream 10.0kb downstream 10000 false scaffold_7: 25894041-25904040 Setaria italica

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122182818 5267 Panicoideae View MSA
124582960 5269 Grass View MSA
122048790 5273 Angiosperm View MSA
121349431 5274 Embryophyte View MSA
123381305 5275 Viridiplantae View MSA

20 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.757        
cufflinks 4.639        
cufflinks 9.922       High
cufflinks 6.788        
cufflinks 5.079        
cufflinks 4.423        
cufflinks 4.603        
cufflinks 3.202       Low
cufflinks 2.731       Low
cufflinks 3.318       Low
cufflinks 4.766        
cufflinks 5.293        
cufflinks 7.042        
cufflinks 11.337       High
cufflinks 6.879        
cufflinks 6.602        
cufflinks 6.174        
cufflinks 7.928        
cufflinks 10.145       High
cufflinks 4.727        

0 Strain