Gene : Seita.7G184000 S. italica v2.2
Defline:  (1 of 1) PTHR31673:SF5 - COBRA-LIKE PROTEIN 6 Genomic Order:  1840
Name:  ? Seita.7G184000 Secondary Identifier:  ? PAC:32706013
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Seita.7G184000 0.5kb upstream 0.5kb upstream 3267 true scaffold_7: 26133049-26136315 Setaria italica
Seita.7G184000 0.5kb upstream 0.5kb upstream 500 false scaffold_7: 26133049-26133548 Setaria italica
Seita.7G184000 0.5kb downstream 0.5kb downstream 3267 true scaffold_7: 26133549-26136815 Setaria italica
Seita.7G184000 0.5kb downstream 0.5kb downstream 500 false scaffold_7: 26136316-26136815 Setaria italica
Seita.7G184000 1.0kb upstream 1.0kb upstream 3767 true scaffold_7: 26132549-26136315 Setaria italica
Seita.7G184000 1.0kb upstream 1.0kb upstream 1000 false scaffold_7: 26132549-26133548 Setaria italica
Seita.7G184000 1.0kb downstream 1.0kb downstream 3767 true scaffold_7: 26133549-26137315 Setaria italica
Seita.7G184000 1.0kb downstream 1.0kb downstream 1000 false scaffold_7: 26136316-26137315 Setaria italica
Seita.7G184000 2.0kb upstream 2.0kb upstream 4767 true scaffold_7: 26131549-26136315 Setaria italica
Seita.7G184000 2.0kb upstream 2.0kb upstream 2000 false scaffold_7: 26131549-26133548 Setaria italica
Seita.7G184000 2.0kb downstream 2.0kb downstream 4767 true scaffold_7: 26133549-26138315 Setaria italica
Seita.7G184000 2.0kb downstream 2.0kb downstream 2000 false scaffold_7: 26136316-26138315 Setaria italica
Seita.7G184000 5.0kb upstream 5.0kb upstream 7767 true scaffold_7: 26128549-26136315 Setaria italica
Seita.7G184000 5.0kb upstream 5.0kb upstream 5000 false scaffold_7: 26128549-26133548 Setaria italica
Seita.7G184000 5.0kb downstream 5.0kb downstream 7767 true scaffold_7: 26133549-26141315 Setaria italica
Seita.7G184000 5.0kb downstream 5.0kb downstream 5000 false scaffold_7: 26136316-26141315 Setaria italica
Seita.7G184000 10.0kb upstream 10.0kb upstream 12767 true scaffold_7: 26123549-26136315 Setaria italica
Seita.7G184000 10.0kb upstream 10.0kb upstream 10000 false scaffold_7: 26123549-26133548 Setaria italica
Seita.7G184000 10.0kb downstream 10.0kb downstream 12767 true scaffold_7: 26133549-26146315 Setaria italica
Seita.7G184000 10.0kb downstream 10.0kb downstream 10000 false scaffold_7: 26136316-26146315 Setaria italica

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026737 5273 Angiosperm View MSA
122194700 5267 Panicoideae View MSA
124580922 5269 Grass View MSA
121296516 5274 Embryophyte View MSA
123334664 5275 Viridiplantae View MSA

20 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.004     Low Low
cufflinks 0.052     Low  
cufflinks 0.009     Low  
cufflinks 0.073     Low High
cufflinks 0.069     Low High
cufflinks 0.032     Low  
cufflinks 0.012     Low  
cufflinks 0.005     Low Low
cufflinks 0.031     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.028     Low  
cufflinks 0.018     Low  
cufflinks 0.037     Low  
cufflinks 0.061     Low High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.007     Low Low
cufflinks 0.019     Low  
cufflinks 0.042     Low  
cufflinks 0.014     Low  
cufflinks 0.018     Low  

0 Strain