Gene : Seita.7G183400 S. italica v2.2
Genomic Order:  1834 Name:  ? Seita.7G183400
Secondary Identifier:  ? PAC:32701837
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Seita.7G183400 0.5kb upstream 0.5kb upstream 5598 true scaffold_7: 26083792-26089389 Setaria italica
Seita.7G183400 0.5kb upstream 0.5kb upstream 500 false scaffold_7: 26088890-26089389 Setaria italica
Seita.7G183400 0.5kb downstream 0.5kb downstream 5598 true scaffold_7: 26083292-26088889 Setaria italica
Seita.7G183400 0.5kb downstream 0.5kb downstream 500 false scaffold_7: 26083292-26083791 Setaria italica
Seita.7G183400 1.0kb upstream 1.0kb upstream 6098 true scaffold_7: 26083792-26089889 Setaria italica
Seita.7G183400 1.0kb upstream 1.0kb upstream 1000 false scaffold_7: 26088890-26089889 Setaria italica
Seita.7G183400 1.0kb downstream 1.0kb downstream 6098 true scaffold_7: 26082792-26088889 Setaria italica
Seita.7G183400 1.0kb downstream 1.0kb downstream 1000 false scaffold_7: 26082792-26083791 Setaria italica
Seita.7G183400 2.0kb upstream 2.0kb upstream 7098 true scaffold_7: 26083792-26090889 Setaria italica
Seita.7G183400 2.0kb upstream 2.0kb upstream 2000 false scaffold_7: 26088890-26090889 Setaria italica
Seita.7G183400 2.0kb downstream 2.0kb downstream 7098 true scaffold_7: 26081792-26088889 Setaria italica
Seita.7G183400 2.0kb downstream 2.0kb downstream 2000 false scaffold_7: 26081792-26083791 Setaria italica
Seita.7G183400 5.0kb upstream 5.0kb upstream 10098 true scaffold_7: 26083792-26093889 Setaria italica
Seita.7G183400 5.0kb upstream 5.0kb upstream 5000 false scaffold_7: 26088890-26093889 Setaria italica
Seita.7G183400 5.0kb downstream 5.0kb downstream 10098 true scaffold_7: 26078792-26088889 Setaria italica
Seita.7G183400 5.0kb downstream 5.0kb downstream 5000 false scaffold_7: 26078792-26083791 Setaria italica
Seita.7G183400 10.0kb upstream 10.0kb upstream 15098 true scaffold_7: 26083792-26098889 Setaria italica
Seita.7G183400 10.0kb upstream 10.0kb upstream 10000 false scaffold_7: 26088890-26098889 Setaria italica
Seita.7G183400 10.0kb downstream 10.0kb downstream 15098 true scaffold_7: 26073792-26088889 Setaria italica
Seita.7G183400 10.0kb downstream 10.0kb downstream 10000 false scaffold_7: 26073792-26083791 Setaria italica

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122184363 5267 Panicoideae View MSA
124578673 5269 Grass View MSA
122051659 5273 Angiosperm View MSA
121312601 5274 Embryophyte View MSA
123349758 5275 Viridiplantae View MSA

20 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.329       High
cufflinks 3.701       High
cufflinks 2.046        
cufflinks 2.406        
cufflinks 2.339        
cufflinks 2.652        
cufflinks 2.278        
cufflinks 2.177        
cufflinks 1.876       Low
cufflinks 3.366       High
cufflinks 2.53        
cufflinks 3.187       High
cufflinks 1.556       Low
cufflinks 2.022        
cufflinks 2.326        
cufflinks 1.976        
cufflinks 2.872        
cufflinks 2.274        
cufflinks 1.74       Low
cufflinks 3.183       High

0 Strain