Gene : Seita.7G183300 S. italica v2.2
Genomic Order:  1833 Name:  ? Seita.7G183300
Secondary Identifier:  ? PAC:32704577
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Seita.7G183300 0.5kb upstream 0.5kb upstream 5903 true scaffold_7: 26059728-26065630 Setaria italica
Seita.7G183300 0.5kb upstream 0.5kb upstream 500 false scaffold_7: 26065131-26065630 Setaria italica
Seita.7G183300 0.5kb downstream 0.5kb downstream 5903 true scaffold_7: 26059228-26065130 Setaria italica
Seita.7G183300 0.5kb downstream 0.5kb downstream 500 false scaffold_7: 26059228-26059727 Setaria italica
Seita.7G183300 1.0kb upstream 1.0kb upstream 6403 true scaffold_7: 26059728-26066130 Setaria italica
Seita.7G183300 1.0kb upstream 1.0kb upstream 1000 false scaffold_7: 26065131-26066130 Setaria italica
Seita.7G183300 1.0kb downstream 1.0kb downstream 6403 true scaffold_7: 26058728-26065130 Setaria italica
Seita.7G183300 1.0kb downstream 1.0kb downstream 1000 false scaffold_7: 26058728-26059727 Setaria italica
Seita.7G183300 2.0kb upstream 2.0kb upstream 7403 true scaffold_7: 26059728-26067130 Setaria italica
Seita.7G183300 2.0kb upstream 2.0kb upstream 2000 false scaffold_7: 26065131-26067130 Setaria italica
Seita.7G183300 2.0kb downstream 2.0kb downstream 7403 true scaffold_7: 26057728-26065130 Setaria italica
Seita.7G183300 2.0kb downstream 2.0kb downstream 2000 false scaffold_7: 26057728-26059727 Setaria italica
Seita.7G183300 5.0kb upstream 5.0kb upstream 10403 true scaffold_7: 26059728-26070130 Setaria italica
Seita.7G183300 5.0kb upstream 5.0kb upstream 5000 false scaffold_7: 26065131-26070130 Setaria italica
Seita.7G183300 5.0kb downstream 5.0kb downstream 10403 true scaffold_7: 26054728-26065130 Setaria italica
Seita.7G183300 5.0kb downstream 5.0kb downstream 5000 false scaffold_7: 26054728-26059727 Setaria italica
Seita.7G183300 10.0kb upstream 10.0kb upstream 15403 true scaffold_7: 26059728-26075130 Setaria italica
Seita.7G183300 10.0kb upstream 10.0kb upstream 10000 false scaffold_7: 26065131-26075130 Setaria italica
Seita.7G183300 10.0kb downstream 10.0kb downstream 15403 true scaffold_7: 26049728-26065130 Setaria italica
Seita.7G183300 10.0kb downstream 10.0kb downstream 10000 false scaffold_7: 26049728-26059727 Setaria italica

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122176515 5267 Panicoideae View MSA
124585156 5269 Grass View MSA
122051659 5273 Angiosperm View MSA
121312601 5274 Embryophyte View MSA
123349758 5275 Viridiplantae View MSA

20 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.391        
cufflinks 2.933       High
cufflinks 0.055     Low  
cufflinks 0.014     Low Low
cufflinks 0.027     Low Low
cufflinks 2.144       High
cufflinks 0.214        
cufflinks 0.176        
cufflinks 0.211        
cufflinks 0.25     Low  
cufflinks 0.305        
cufflinks 0.874       High
cufflinks 0.229        
cufflinks 0.086     Low  
cufflinks 0.204        
cufflinks 0.091     Low  
cufflinks 0.384        
cufflinks 0.068     Low  
cufflinks 0.065     Low  
cufflinks 0.708        

0 Strain