Gene : Seita.7G113400 S. italica v2.2
Defline:  (1 of 4) KOG0552 - FKBP-type peptidyl-prolyl cis-trans isomerase Genomic Order:  1134
Name:  ? Seita.7G113400 Secondary Identifier:  ? PAC:32704762
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Seita.7G113400 0.5kb upstream 0.5kb upstream 4943 true scaffold_7: 21231257-21236199 Setaria italica
Seita.7G113400 0.5kb upstream 0.5kb upstream 500 false scaffold_7: 21231257-21231756 Setaria italica
Seita.7G113400 0.5kb downstream 0.5kb downstream 4943 true scaffold_7: 21231757-21236699 Setaria italica
Seita.7G113400 0.5kb downstream 0.5kb downstream 500 false scaffold_7: 21236200-21236699 Setaria italica
Seita.7G113400 1.0kb upstream 1.0kb upstream 5443 true scaffold_7: 21230757-21236199 Setaria italica
Seita.7G113400 1.0kb upstream 1.0kb upstream 1000 false scaffold_7: 21230757-21231756 Setaria italica
Seita.7G113400 1.0kb downstream 1.0kb downstream 5443 true scaffold_7: 21231757-21237199 Setaria italica
Seita.7G113400 1.0kb downstream 1.0kb downstream 1000 false scaffold_7: 21236200-21237199 Setaria italica
Seita.7G113400 2.0kb upstream 2.0kb upstream 6443 true scaffold_7: 21229757-21236199 Setaria italica
Seita.7G113400 2.0kb upstream 2.0kb upstream 2000 false scaffold_7: 21229757-21231756 Setaria italica
Seita.7G113400 2.0kb downstream 2.0kb downstream 6443 true scaffold_7: 21231757-21238199 Setaria italica
Seita.7G113400 2.0kb downstream 2.0kb downstream 2000 false scaffold_7: 21236200-21238199 Setaria italica
Seita.7G113400 5.0kb upstream 5.0kb upstream 9443 true scaffold_7: 21226757-21236199 Setaria italica
Seita.7G113400 5.0kb upstream 5.0kb upstream 5000 false scaffold_7: 21226757-21231756 Setaria italica
Seita.7G113400 5.0kb downstream 5.0kb downstream 9443 true scaffold_7: 21231757-21241199 Setaria italica
Seita.7G113400 5.0kb downstream 5.0kb downstream 5000 false scaffold_7: 21236200-21241199 Setaria italica
Seita.7G113400 10.0kb upstream 10.0kb upstream 14443 true scaffold_7: 21221757-21236199 Setaria italica
Seita.7G113400 10.0kb upstream 10.0kb upstream 10000 false scaffold_7: 21221757-21231756 Setaria italica
Seita.7G113400 10.0kb downstream 10.0kb downstream 14443 true scaffold_7: 21231757-21246199 Setaria italica
Seita.7G113400 10.0kb downstream 10.0kb downstream 10000 false scaffold_7: 21236200-21246199 Setaria italica

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122183985 5267 Panicoideae View MSA
124568610 5269 Grass View MSA
122047643 5273 Angiosperm View MSA
123428998 5275 Viridiplantae View MSA
121346019 5274 Embryophyte View MSA

20 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 8.511        
cufflinks 15.081     High  
cufflinks 4.037        
cufflinks 1.631       Low
cufflinks 3.71        
cufflinks 17.329     High High
cufflinks 7.147        
cufflinks 11.072        
cufflinks 15.943     High High
cufflinks 4.316        
cufflinks 10.973        
cufflinks 12.707        
cufflinks 5.437        
cufflinks 7.707        
cufflinks 15.377     High High
cufflinks 3.715        
cufflinks 15.099     High  
cufflinks 4.15        
cufflinks 2.544       Low
cufflinks 16.652     High High

0 Strain