Gene : Seita.7G112900 S. italica v2.2
Defline:  (1 of 42) PF04525 - LURP-one-related (LOR) Genomic Order:  1129
Name:  ? Seita.7G112900 Secondary Identifier:  ? PAC:32703359
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Seita.7G112900 0.5kb upstream 0.5kb upstream 2206 true scaffold_7: 21212100-21214305 Setaria italica
Seita.7G112900 0.5kb upstream 0.5kb upstream 500 false scaffold_7: 21212100-21212599 Setaria italica
Seita.7G112900 0.5kb downstream 0.5kb downstream 2206 true scaffold_7: 21212600-21214805 Setaria italica
Seita.7G112900 0.5kb downstream 0.5kb downstream 500 false scaffold_7: 21214306-21214805 Setaria italica
Seita.7G112900 1.0kb upstream 1.0kb upstream 2706 true scaffold_7: 21211600-21214305 Setaria italica
Seita.7G112900 1.0kb upstream 1.0kb upstream 1000 false scaffold_7: 21211600-21212599 Setaria italica
Seita.7G112900 1.0kb downstream 1.0kb downstream 2706 true scaffold_7: 21212600-21215305 Setaria italica
Seita.7G112900 1.0kb downstream 1.0kb downstream 1000 false scaffold_7: 21214306-21215305 Setaria italica
Seita.7G112900 2.0kb upstream 2.0kb upstream 3706 true scaffold_7: 21210600-21214305 Setaria italica
Seita.7G112900 2.0kb upstream 2.0kb upstream 2000 false scaffold_7: 21210600-21212599 Setaria italica
Seita.7G112900 2.0kb downstream 2.0kb downstream 3706 true scaffold_7: 21212600-21216305 Setaria italica
Seita.7G112900 2.0kb downstream 2.0kb downstream 2000 false scaffold_7: 21214306-21216305 Setaria italica
Seita.7G112900 5.0kb upstream 5.0kb upstream 6706 true scaffold_7: 21207600-21214305 Setaria italica
Seita.7G112900 5.0kb upstream 5.0kb upstream 5000 false scaffold_7: 21207600-21212599 Setaria italica
Seita.7G112900 5.0kb downstream 5.0kb downstream 6706 true scaffold_7: 21212600-21219305 Setaria italica
Seita.7G112900 5.0kb downstream 5.0kb downstream 5000 false scaffold_7: 21214306-21219305 Setaria italica
Seita.7G112900 10.0kb upstream 10.0kb upstream 11706 true scaffold_7: 21202600-21214305 Setaria italica
Seita.7G112900 10.0kb upstream 10.0kb upstream 10000 false scaffold_7: 21202600-21212599 Setaria italica
Seita.7G112900 10.0kb downstream 10.0kb downstream 11706 true scaffold_7: 21212600-21224305 Setaria italica
Seita.7G112900 10.0kb downstream 10.0kb downstream 10000 false scaffold_7: 21214306-21224305 Setaria italica

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122176656 5267 Panicoideae View MSA
124573100 5269 Grass View MSA
122042677 5273 Angiosperm View MSA
121309998 5274 Embryophyte View MSA
123347607 5275 Viridiplantae View MSA

20 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.181        
cufflinks 0.288        
cufflinks 0.019     Low Low
cufflinks 0.014     Low Low
cufflinks 0.005     Low Low
cufflinks 0.233        
cufflinks 0.054     Low  
cufflinks 0.137        
cufflinks 0.105     Low  
cufflinks 0.209     Low  
cufflinks 0.195        
cufflinks 2.008       High
cufflinks 0.501        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 3.411       High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 1.485       High
cufflinks 0.012     Low Low
cufflinks 0.039     Low  
cufflinks 1.796       High

0 Strain