Gene : Seita.7G126700 S. italica v2.2
Defline:  (1 of 5) KOG4473 - Uncharacterized membrane protein Genomic Order:  1267
Name:  ? Seita.7G126700 Secondary Identifier:  ? PAC:32704621
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Seita.7G126700 0.5kb upstream 0.5kb upstream 3017 true scaffold_7: 22105998-22109014 Setaria italica
Seita.7G126700 0.5kb upstream 0.5kb upstream 500 false scaffold_7: 22108515-22109014 Setaria italica
Seita.7G126700 0.5kb downstream 0.5kb downstream 3017 true scaffold_7: 22105498-22108514 Setaria italica
Seita.7G126700 0.5kb downstream 0.5kb downstream 500 false scaffold_7: 22105498-22105997 Setaria italica
Seita.7G126700 1.0kb upstream 1.0kb upstream 3517 true scaffold_7: 22105998-22109514 Setaria italica
Seita.7G126700 1.0kb upstream 1.0kb upstream 1000 false scaffold_7: 22108515-22109514 Setaria italica
Seita.7G126700 1.0kb downstream 1.0kb downstream 3517 true scaffold_7: 22104998-22108514 Setaria italica
Seita.7G126700 1.0kb downstream 1.0kb downstream 1000 false scaffold_7: 22104998-22105997 Setaria italica
Seita.7G126700 2.0kb upstream 2.0kb upstream 4517 true scaffold_7: 22105998-22110514 Setaria italica
Seita.7G126700 2.0kb upstream 2.0kb upstream 2000 false scaffold_7: 22108515-22110514 Setaria italica
Seita.7G126700 2.0kb downstream 2.0kb downstream 4517 true scaffold_7: 22103998-22108514 Setaria italica
Seita.7G126700 2.0kb downstream 2.0kb downstream 2000 false scaffold_7: 22103998-22105997 Setaria italica
Seita.7G126700 5.0kb upstream 5.0kb upstream 7517 true scaffold_7: 22105998-22113514 Setaria italica
Seita.7G126700 5.0kb upstream 5.0kb upstream 5000 false scaffold_7: 22108515-22113514 Setaria italica
Seita.7G126700 5.0kb downstream 5.0kb downstream 7517 true scaffold_7: 22100998-22108514 Setaria italica
Seita.7G126700 5.0kb downstream 5.0kb downstream 5000 false scaffold_7: 22100998-22105997 Setaria italica
Seita.7G126700 10.0kb upstream 10.0kb upstream 12517 true scaffold_7: 22105998-22118514 Setaria italica
Seita.7G126700 10.0kb upstream 10.0kb upstream 10000 false scaffold_7: 22108515-22118514 Setaria italica
Seita.7G126700 10.0kb downstream 10.0kb downstream 12517 true scaffold_7: 22095998-22108514 Setaria italica
Seita.7G126700 10.0kb downstream 10.0kb downstream 10000 false scaffold_7: 22095998-22105997 Setaria italica

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122179307 5267 Panicoideae View MSA
124574925 5269 Grass View MSA
122043117 5273 Angiosperm View MSA
121348483 5274 Embryophyte View MSA
123428360 5275 Viridiplantae View MSA

20 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.018        
cufflinks 1.013       Low
cufflinks 1.949        
cufflinks 3.704       High
cufflinks 1.988        
cufflinks 0.804       Low
cufflinks 3.108        
cufflinks 6.068       High
cufflinks 2.987        
cufflinks 2.904        
cufflinks 2.45        
cufflinks 1.607        
cufflinks 3.241        
cufflinks 2.66        
cufflinks 0.969       Low
cufflinks 1.909        
cufflinks 1.486        
cufflinks 1.286        
cufflinks 2.459        
cufflinks 1.236       Low

0 Strain