Gene : Seita.7G131900 S. italica v2.2
Defline:  (1 of 2) PTHR10293:SF16 - GLUTAREDOXIN-RELATED PROTEIN 5, MITOCHONDRIAL Genomic Order:  1319
Name:  ? Seita.7G131900 Secondary Identifier:  ? PAC:32705363
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Seita.7G131900 0.5kb upstream 0.5kb upstream 3961 true scaffold_7: 22466197-22470157 Setaria italica
Seita.7G131900 0.5kb upstream 0.5kb upstream 500 false scaffold_7: 22469658-22470157 Setaria italica
Seita.7G131900 0.5kb downstream 0.5kb downstream 3961 true scaffold_7: 22465697-22469657 Setaria italica
Seita.7G131900 0.5kb downstream 0.5kb downstream 500 false scaffold_7: 22465697-22466196 Setaria italica
Seita.7G131900 1.0kb upstream 1.0kb upstream 4461 true scaffold_7: 22466197-22470657 Setaria italica
Seita.7G131900 1.0kb upstream 1.0kb upstream 1000 false scaffold_7: 22469658-22470657 Setaria italica
Seita.7G131900 1.0kb downstream 1.0kb downstream 4461 true scaffold_7: 22465197-22469657 Setaria italica
Seita.7G131900 1.0kb downstream 1.0kb downstream 1000 false scaffold_7: 22465197-22466196 Setaria italica
Seita.7G131900 2.0kb upstream 2.0kb upstream 5461 true scaffold_7: 22466197-22471657 Setaria italica
Seita.7G131900 2.0kb upstream 2.0kb upstream 2000 false scaffold_7: 22469658-22471657 Setaria italica
Seita.7G131900 2.0kb downstream 2.0kb downstream 5461 true scaffold_7: 22464197-22469657 Setaria italica
Seita.7G131900 2.0kb downstream 2.0kb downstream 2000 false scaffold_7: 22464197-22466196 Setaria italica
Seita.7G131900 5.0kb upstream 5.0kb upstream 8461 true scaffold_7: 22466197-22474657 Setaria italica
Seita.7G131900 5.0kb upstream 5.0kb upstream 5000 false scaffold_7: 22469658-22474657 Setaria italica
Seita.7G131900 5.0kb downstream 5.0kb downstream 8461 true scaffold_7: 22461197-22469657 Setaria italica
Seita.7G131900 5.0kb downstream 5.0kb downstream 5000 false scaffold_7: 22461197-22466196 Setaria italica
Seita.7G131900 10.0kb upstream 10.0kb upstream 13461 true scaffold_7: 22466197-22479657 Setaria italica
Seita.7G131900 10.0kb upstream 10.0kb upstream 10000 false scaffold_7: 22469658-22479657 Setaria italica
Seita.7G131900 10.0kb downstream 10.0kb downstream 13461 true scaffold_7: 22456197-22469657 Setaria italica
Seita.7G131900 10.0kb downstream 10.0kb downstream 10000 false scaffold_7: 22456197-22466196 Setaria italica

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122175578 5267 Panicoideae View MSA
124586477 5269 Grass View MSA
122043030 5273 Angiosperm View MSA
121347328 5274 Embryophyte View MSA
123424474 5275 Viridiplantae View MSA

20 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.189        
cufflinks 6.553        
cufflinks 3.688       Low
cufflinks 2.949       Low
cufflinks 3.544       Low
cufflinks 6.397        
cufflinks 4.592        
cufflinks 6.564        
cufflinks 5.294        
cufflinks 8.12       High
cufflinks 6.792        
cufflinks 6.755        
cufflinks 7.878       High
cufflinks 5.036        
cufflinks 5.718        
cufflinks 4.325        
cufflinks 7.501       High
cufflinks 4.03        
cufflinks 3.818       Low
cufflinks 6.572        

0 Strain