Gene : Seita.7G132500 S. italica v2.2
Defline:  (1 of 1) PTHR12668//PTHR12668:SF16 - TRANSMEMBRANE PROTEIN 14, 15 Genomic Order:  1325
Name:  ? Seita.7G132500 Secondary Identifier:  ? PAC:32702452
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Seita.7G132500 0.5kb upstream 0.5kb upstream 3018 true scaffold_7: 22503764-22506781 Setaria italica
Seita.7G132500 0.5kb upstream 0.5kb upstream 500 false scaffold_7: 22506282-22506781 Setaria italica
Seita.7G132500 0.5kb downstream 0.5kb downstream 3018 true scaffold_7: 22503264-22506281 Setaria italica
Seita.7G132500 0.5kb downstream 0.5kb downstream 500 false scaffold_7: 22503264-22503763 Setaria italica
Seita.7G132500 1.0kb upstream 1.0kb upstream 3518 true scaffold_7: 22503764-22507281 Setaria italica
Seita.7G132500 1.0kb upstream 1.0kb upstream 1000 false scaffold_7: 22506282-22507281 Setaria italica
Seita.7G132500 1.0kb downstream 1.0kb downstream 3518 true scaffold_7: 22502764-22506281 Setaria italica
Seita.7G132500 1.0kb downstream 1.0kb downstream 1000 false scaffold_7: 22502764-22503763 Setaria italica
Seita.7G132500 2.0kb upstream 2.0kb upstream 4518 true scaffold_7: 22503764-22508281 Setaria italica
Seita.7G132500 2.0kb upstream 2.0kb upstream 2000 false scaffold_7: 22506282-22508281 Setaria italica
Seita.7G132500 2.0kb downstream 2.0kb downstream 4518 true scaffold_7: 22501764-22506281 Setaria italica
Seita.7G132500 2.0kb downstream 2.0kb downstream 2000 false scaffold_7: 22501764-22503763 Setaria italica
Seita.7G132500 5.0kb upstream 5.0kb upstream 7518 true scaffold_7: 22503764-22511281 Setaria italica
Seita.7G132500 5.0kb upstream 5.0kb upstream 5000 false scaffold_7: 22506282-22511281 Setaria italica
Seita.7G132500 5.0kb downstream 5.0kb downstream 7518 true scaffold_7: 22498764-22506281 Setaria italica
Seita.7G132500 5.0kb downstream 5.0kb downstream 5000 false scaffold_7: 22498764-22503763 Setaria italica
Seita.7G132500 10.0kb upstream 10.0kb upstream 12518 true scaffold_7: 22503764-22516281 Setaria italica
Seita.7G132500 10.0kb upstream 10.0kb upstream 10000 false scaffold_7: 22506282-22516281 Setaria italica
Seita.7G132500 10.0kb downstream 10.0kb downstream 12518 true scaffold_7: 22493764-22506281 Setaria italica
Seita.7G132500 10.0kb downstream 10.0kb downstream 10000 false scaffold_7: 22493764-22503763 Setaria italica

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122178011 5267 Panicoideae View MSA
124576968 5269 Grass View MSA
122045627 5273 Angiosperm View MSA
121351316 5274 Embryophyte View MSA
123426664 5275 Viridiplantae View MSA

20 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.053        
cufflinks 2.58        
cufflinks 2.759        
cufflinks 1.961        
cufflinks 2.083        
cufflinks 2.668        
cufflinks 1.582       Low
cufflinks 2.034        
cufflinks 1.684       Low
cufflinks 3.693       High
cufflinks 2.249        
cufflinks 2.013        
cufflinks 2.333        
cufflinks 3.463       High
cufflinks 1.798        
cufflinks 1.94        
cufflinks 2.97       High
cufflinks 1.7       Low
cufflinks 2.528        
cufflinks 2.154        

0 Strain