Gene : Seita.7G130000 S. italica v2.2
Defline:  (1 of 1) PTHR14513 - PROTECTION OF TELOMERES 1 Genomic Order:  1300
Name:  ? Seita.7G130000 Secondary Identifier:  ? PAC:32703112
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Seita.7G130000 0.5kb upstream 0.5kb upstream 4993 true scaffold_7: 22325507-22330499 Setaria italica
Seita.7G130000 0.5kb upstream 0.5kb upstream 500 false scaffold_7: 22330000-22330499 Setaria italica
Seita.7G130000 0.5kb downstream 0.5kb downstream 4993 true scaffold_7: 22325007-22329999 Setaria italica
Seita.7G130000 0.5kb downstream 0.5kb downstream 500 false scaffold_7: 22325007-22325506 Setaria italica
Seita.7G130000 1.0kb upstream 1.0kb upstream 5493 true scaffold_7: 22325507-22330999 Setaria italica
Seita.7G130000 1.0kb upstream 1.0kb upstream 1000 false scaffold_7: 22330000-22330999 Setaria italica
Seita.7G130000 1.0kb downstream 1.0kb downstream 5493 true scaffold_7: 22324507-22329999 Setaria italica
Seita.7G130000 1.0kb downstream 1.0kb downstream 1000 false scaffold_7: 22324507-22325506 Setaria italica
Seita.7G130000 2.0kb upstream 2.0kb upstream 6493 true scaffold_7: 22325507-22331999 Setaria italica
Seita.7G130000 2.0kb upstream 2.0kb upstream 2000 false scaffold_7: 22330000-22331999 Setaria italica
Seita.7G130000 2.0kb downstream 2.0kb downstream 6493 true scaffold_7: 22323507-22329999 Setaria italica
Seita.7G130000 2.0kb downstream 2.0kb downstream 2000 false scaffold_7: 22323507-22325506 Setaria italica
Seita.7G130000 5.0kb upstream 5.0kb upstream 9493 true scaffold_7: 22325507-22334999 Setaria italica
Seita.7G130000 5.0kb upstream 5.0kb upstream 5000 false scaffold_7: 22330000-22334999 Setaria italica
Seita.7G130000 5.0kb downstream 5.0kb downstream 9493 true scaffold_7: 22320507-22329999 Setaria italica
Seita.7G130000 5.0kb downstream 5.0kb downstream 5000 false scaffold_7: 22320507-22325506 Setaria italica
Seita.7G130000 10.0kb upstream 10.0kb upstream 14493 true scaffold_7: 22325507-22339999 Setaria italica
Seita.7G130000 10.0kb upstream 10.0kb upstream 10000 false scaffold_7: 22330000-22339999 Setaria italica
Seita.7G130000 10.0kb downstream 10.0kb downstream 14493 true scaffold_7: 22315507-22329999 Setaria italica
Seita.7G130000 10.0kb downstream 10.0kb downstream 10000 false scaffold_7: 22315507-22325506 Setaria italica

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122178580 5267 Panicoideae View MSA
124572897 5269 Grass View MSA
122044561 5273 Angiosperm View MSA
121346755 5274 Embryophyte View MSA
123426673 5275 Viridiplantae View MSA

20 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.71       High
cufflinks 5.538       High
cufflinks 1.795        
cufflinks 1.282       Low
cufflinks 1.203       Low
cufflinks 5.918       High
cufflinks 2.977        
cufflinks 2.326        
cufflinks 2.001        
cufflinks 2.479        
cufflinks 2.493        
cufflinks 1.742        
cufflinks 1.471        
cufflinks 1.778        
cufflinks 1.823        
cufflinks 3.615        
cufflinks 2.232        
cufflinks 2.585        
cufflinks 0.79       Low
cufflinks 2.226        

0 Strain