Gene : Seita.7G136800 S. italica v2.2
Defline:  (1 of 1) PTHR10774//PTHR10774:SF94 - EXTENDED SYNAPTOTAGMIN-RELATED Genomic Order:  1368
Name:  ? Seita.7G136800 Secondary Identifier:  ? PAC:32704998
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Seita.7G136800 0.5kb upstream 0.5kb upstream 5357 true scaffold_7: 22831697-22837053 Setaria italica
Seita.7G136800 0.5kb upstream 0.5kb upstream 500 false scaffold_7: 22831697-22832196 Setaria italica
Seita.7G136800 0.5kb downstream 0.5kb downstream 5357 true scaffold_7: 22832197-22837553 Setaria italica
Seita.7G136800 0.5kb downstream 0.5kb downstream 500 false scaffold_7: 22837054-22837553 Setaria italica
Seita.7G136800 1.0kb upstream 1.0kb upstream 5857 true scaffold_7: 22831197-22837053 Setaria italica
Seita.7G136800 1.0kb upstream 1.0kb upstream 1000 false scaffold_7: 22831197-22832196 Setaria italica
Seita.7G136800 1.0kb downstream 1.0kb downstream 5857 true scaffold_7: 22832197-22838053 Setaria italica
Seita.7G136800 1.0kb downstream 1.0kb downstream 1000 false scaffold_7: 22837054-22838053 Setaria italica
Seita.7G136800 2.0kb upstream 2.0kb upstream 6857 true scaffold_7: 22830197-22837053 Setaria italica
Seita.7G136800 2.0kb upstream 2.0kb upstream 2000 false scaffold_7: 22830197-22832196 Setaria italica
Seita.7G136800 2.0kb downstream 2.0kb downstream 6857 true scaffold_7: 22832197-22839053 Setaria italica
Seita.7G136800 2.0kb downstream 2.0kb downstream 2000 false scaffold_7: 22837054-22839053 Setaria italica
Seita.7G136800 5.0kb upstream 5.0kb upstream 9857 true scaffold_7: 22827197-22837053 Setaria italica
Seita.7G136800 5.0kb upstream 5.0kb upstream 5000 false scaffold_7: 22827197-22832196 Setaria italica
Seita.7G136800 5.0kb downstream 5.0kb downstream 9857 true scaffold_7: 22832197-22842053 Setaria italica
Seita.7G136800 5.0kb downstream 5.0kb downstream 5000 false scaffold_7: 22837054-22842053 Setaria italica
Seita.7G136800 10.0kb upstream 10.0kb upstream 14857 true scaffold_7: 22822197-22837053 Setaria italica
Seita.7G136800 10.0kb upstream 10.0kb upstream 10000 false scaffold_7: 22822197-22832196 Setaria italica
Seita.7G136800 10.0kb downstream 10.0kb downstream 14857 true scaffold_7: 22832197-22847053 Setaria italica
Seita.7G136800 10.0kb downstream 10.0kb downstream 10000 false scaffold_7: 22837054-22847053 Setaria italica

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122185494 5267 Panicoideae View MSA
124582170 5269 Grass View MSA
122048530 5273 Angiosperm View MSA
121350183 5274 Embryophyte View MSA
123381609 5275 Viridiplantae View MSA

20 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.983        
cufflinks 0.348       Low
cufflinks 0.441        
cufflinks 1.427        
cufflinks 1.798        
cufflinks 0.422        
cufflinks 0.321       Low
cufflinks 0.351       Low
cufflinks 0.474        
cufflinks 1.333        
cufflinks 1.051        
cufflinks 6.191       High
cufflinks 2.934        
cufflinks 1.114        
cufflinks 0.701        
cufflinks 1.63        
cufflinks 0.544        
cufflinks 13.25     High High
cufflinks 4.068       High
cufflinks 0.51        

0 Strain