Gene : Seita.7G136000 S. italica v2.2
Defline:  (1 of 3) PTHR11102//PTHR11102:SF99 - SEL-1-LIKE PROTEIN Genomic Order:  1360
Name:  ? Seita.7G136000 Secondary Identifier:  ? PAC:32705728
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Seita.7G136000 0.5kb upstream 0.5kb upstream 4140 true scaffold_7: 22774808-22778947 Setaria italica
Seita.7G136000 0.5kb upstream 0.5kb upstream 500 false scaffold_7: 22774808-22775307 Setaria italica
Seita.7G136000 0.5kb downstream 0.5kb downstream 4140 true scaffold_7: 22775308-22779447 Setaria italica
Seita.7G136000 0.5kb downstream 0.5kb downstream 500 false scaffold_7: 22778948-22779447 Setaria italica
Seita.7G136000 1.0kb upstream 1.0kb upstream 4640 true scaffold_7: 22774308-22778947 Setaria italica
Seita.7G136000 1.0kb upstream 1.0kb upstream 1000 false scaffold_7: 22774308-22775307 Setaria italica
Seita.7G136000 1.0kb downstream 1.0kb downstream 4640 true scaffold_7: 22775308-22779947 Setaria italica
Seita.7G136000 1.0kb downstream 1.0kb downstream 1000 false scaffold_7: 22778948-22779947 Setaria italica
Seita.7G136000 2.0kb upstream 2.0kb upstream 5640 true scaffold_7: 22773308-22778947 Setaria italica
Seita.7G136000 2.0kb upstream 2.0kb upstream 2000 false scaffold_7: 22773308-22775307 Setaria italica
Seita.7G136000 2.0kb downstream 2.0kb downstream 5640 true scaffold_7: 22775308-22780947 Setaria italica
Seita.7G136000 2.0kb downstream 2.0kb downstream 2000 false scaffold_7: 22778948-22780947 Setaria italica
Seita.7G136000 5.0kb upstream 5.0kb upstream 8640 true scaffold_7: 22770308-22778947 Setaria italica
Seita.7G136000 5.0kb upstream 5.0kb upstream 5000 false scaffold_7: 22770308-22775307 Setaria italica
Seita.7G136000 5.0kb downstream 5.0kb downstream 8640 true scaffold_7: 22775308-22783947 Setaria italica
Seita.7G136000 5.0kb downstream 5.0kb downstream 5000 false scaffold_7: 22778948-22783947 Setaria italica
Seita.7G136000 10.0kb upstream 10.0kb upstream 13640 true scaffold_7: 22765308-22778947 Setaria italica
Seita.7G136000 10.0kb upstream 10.0kb upstream 10000 false scaffold_7: 22765308-22775307 Setaria italica
Seita.7G136000 10.0kb downstream 10.0kb downstream 13640 true scaffold_7: 22775308-22788947 Setaria italica
Seita.7G136000 10.0kb downstream 10.0kb downstream 10000 false scaffold_7: 22778948-22788947 Setaria italica

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122184762 5267 Panicoideae View MSA
124570277 5269 Grass View MSA
122044811 5273 Angiosperm View MSA
123428907 5275 Viridiplantae View MSA
121345855 5274 Embryophyte View MSA

20 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.982        
cufflinks 1.406       Low
cufflinks 1.634       Low
cufflinks 1.687        
cufflinks 2.501        
cufflinks 1.542       Low
cufflinks 2.344        
cufflinks 1.734        
cufflinks 2.23        
cufflinks 2.425        
cufflinks 1.651        
cufflinks 3.914       High
cufflinks 2.507        
cufflinks 1.991        
cufflinks 3.375       High
cufflinks 2.371        
cufflinks 4.758       High
cufflinks 2.046        
cufflinks 2.198        
cufflinks 3.277       High

0 Strain