Gene : Seita.7G141700 S. italica v2.2
Defline:  (1 of 1) PTHR11669:SF3 - PROTEIN STICHEL-LIKE 2 Genomic Order:  1417
Name:  ? Seita.7G141700 Secondary Identifier:  ? PAC:32704960
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Seita.7G141700 0.5kb upstream 0.5kb upstream 6350 true scaffold_7: 23157591-23163940 Setaria italica
Seita.7G141700 0.5kb upstream 0.5kb upstream 500 false scaffold_7: 23157591-23158090 Setaria italica
Seita.7G141700 0.5kb downstream 0.5kb downstream 6350 true scaffold_7: 23158091-23164440 Setaria italica
Seita.7G141700 0.5kb downstream 0.5kb downstream 500 false scaffold_7: 23163941-23164440 Setaria italica
Seita.7G141700 1.0kb upstream 1.0kb upstream 6850 true scaffold_7: 23157091-23163940 Setaria italica
Seita.7G141700 1.0kb upstream 1.0kb upstream 1000 false scaffold_7: 23157091-23158090 Setaria italica
Seita.7G141700 1.0kb downstream 1.0kb downstream 6850 true scaffold_7: 23158091-23164940 Setaria italica
Seita.7G141700 1.0kb downstream 1.0kb downstream 1000 false scaffold_7: 23163941-23164940 Setaria italica
Seita.7G141700 2.0kb upstream 2.0kb upstream 7850 true scaffold_7: 23156091-23163940 Setaria italica
Seita.7G141700 2.0kb upstream 2.0kb upstream 2000 false scaffold_7: 23156091-23158090 Setaria italica
Seita.7G141700 2.0kb downstream 2.0kb downstream 7850 true scaffold_7: 23158091-23165940 Setaria italica
Seita.7G141700 2.0kb downstream 2.0kb downstream 2000 false scaffold_7: 23163941-23165940 Setaria italica
Seita.7G141700 5.0kb upstream 5.0kb upstream 10850 true scaffold_7: 23153091-23163940 Setaria italica
Seita.7G141700 5.0kb upstream 5.0kb upstream 5000 false scaffold_7: 23153091-23158090 Setaria italica
Seita.7G141700 5.0kb downstream 5.0kb downstream 10850 true scaffold_7: 23158091-23168940 Setaria italica
Seita.7G141700 5.0kb downstream 5.0kb downstream 5000 false scaffold_7: 23163941-23168940 Setaria italica
Seita.7G141700 10.0kb upstream 10.0kb upstream 15850 true scaffold_7: 23148091-23163940 Setaria italica
Seita.7G141700 10.0kb upstream 10.0kb upstream 10000 false scaffold_7: 23148091-23158090 Setaria italica
Seita.7G141700 10.0kb downstream 10.0kb downstream 15850 true scaffold_7: 23158091-23173940 Setaria italica
Seita.7G141700 10.0kb downstream 10.0kb downstream 10000 false scaffold_7: 23163941-23173940 Setaria italica

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122176590 5267 Panicoideae View MSA
124586161 5269 Grass View MSA
122048856 5273 Angiosperm View MSA
121350538 5274 Embryophyte View MSA
123381780 5275 Viridiplantae View MSA

20 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.299        
cufflinks 5.086        
cufflinks 0.003     Low Low
cufflinks 0.002     Low Low
cufflinks 0.014     Low Low
cufflinks 5.61        
cufflinks 2.431        
cufflinks 2.419        
cufflinks 1.036        
cufflinks 1.802        
cufflinks 2.331        
cufflinks 2.195        
cufflinks 0.756        
cufflinks 0.014     Low Low
cufflinks 3.065        
cufflinks 1.046        
cufflinks 2.889        
cufflinks 0.439        
cufflinks 0.01     Low Low
cufflinks 3.213        

0 Strain