Gene : Seita.7G143400 S. italica v2.2
Defline:  (1 of 1) PTHR11135 - HISTONE ACETYLTRANSFERASE-RELATED Genomic Order:  1434
Name:  ? Seita.7G143400 Secondary Identifier:  ? PAC:32704790
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Seita.7G143400 0.5kb upstream 0.5kb upstream 4820 true scaffold_7: 23254047-23258866 Setaria italica
Seita.7G143400 0.5kb upstream 0.5kb upstream 500 false scaffold_7: 23258367-23258866 Setaria italica
Seita.7G143400 0.5kb downstream 0.5kb downstream 4820 true scaffold_7: 23253547-23258366 Setaria italica
Seita.7G143400 0.5kb downstream 0.5kb downstream 500 false scaffold_7: 23253547-23254046 Setaria italica
Seita.7G143400 1.0kb upstream 1.0kb upstream 5320 true scaffold_7: 23254047-23259366 Setaria italica
Seita.7G143400 1.0kb upstream 1.0kb upstream 1000 false scaffold_7: 23258367-23259366 Setaria italica
Seita.7G143400 1.0kb downstream 1.0kb downstream 5320 true scaffold_7: 23253047-23258366 Setaria italica
Seita.7G143400 1.0kb downstream 1.0kb downstream 1000 false scaffold_7: 23253047-23254046 Setaria italica
Seita.7G143400 2.0kb upstream 2.0kb upstream 6320 true scaffold_7: 23254047-23260366 Setaria italica
Seita.7G143400 2.0kb upstream 2.0kb upstream 2000 false scaffold_7: 23258367-23260366 Setaria italica
Seita.7G143400 2.0kb downstream 2.0kb downstream 6320 true scaffold_7: 23252047-23258366 Setaria italica
Seita.7G143400 2.0kb downstream 2.0kb downstream 2000 false scaffold_7: 23252047-23254046 Setaria italica
Seita.7G143400 5.0kb upstream 5.0kb upstream 9320 true scaffold_7: 23254047-23263366 Setaria italica
Seita.7G143400 5.0kb upstream 5.0kb upstream 5000 false scaffold_7: 23258367-23263366 Setaria italica
Seita.7G143400 5.0kb downstream 5.0kb downstream 9320 true scaffold_7: 23249047-23258366 Setaria italica
Seita.7G143400 5.0kb downstream 5.0kb downstream 5000 false scaffold_7: 23249047-23254046 Setaria italica
Seita.7G143400 10.0kb upstream 10.0kb upstream 14320 true scaffold_7: 23254047-23268366 Setaria italica
Seita.7G143400 10.0kb upstream 10.0kb upstream 10000 false scaffold_7: 23258367-23268366 Setaria italica
Seita.7G143400 10.0kb downstream 10.0kb downstream 14320 true scaffold_7: 23244047-23258366 Setaria italica
Seita.7G143400 10.0kb downstream 10.0kb downstream 10000 false scaffold_7: 23244047-23254046 Setaria italica

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122191363 5267 Panicoideae View MSA
124569652 5269 Grass View MSA
122042857 5273 Angiosperm View MSA
121345781 5274 Embryophyte View MSA
123424234 5275 Viridiplantae View MSA

20 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 10.872        
cufflinks 9.459        
cufflinks 6.754        
cufflinks 5.346       Low
cufflinks 5.513       Low
cufflinks 8.692        
cufflinks 5.957       Low
cufflinks 6.004       Low
cufflinks 6.688        
cufflinks 10.176        
cufflinks 9.096        
cufflinks 11.842       High
cufflinks 8.499        
cufflinks 8.483        
cufflinks 10.285        
cufflinks 7.601        
cufflinks 11.957       High
cufflinks 15.368     High High
cufflinks 5.149       Low
cufflinks 9.492        

0 Strain