Gene : Seita.7G146700 S. italica v2.2
Genomic Order:  1467 Name:  ? Seita.7G146700
Secondary Identifier:  ? PAC:32703764
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Seita.7G146700 0.5kb upstream 0.5kb upstream 7088 true scaffold_7: 23489513-23496600 Setaria italica
Seita.7G146700 0.5kb upstream 0.5kb upstream 500 false scaffold_7: 23489513-23490012 Setaria italica
Seita.7G146700 0.5kb downstream 0.5kb downstream 7088 true scaffold_7: 23490013-23497100 Setaria italica
Seita.7G146700 0.5kb downstream 0.5kb downstream 500 false scaffold_7: 23496601-23497100 Setaria italica
Seita.7G146700 1.0kb upstream 1.0kb upstream 7588 true scaffold_7: 23489013-23496600 Setaria italica
Seita.7G146700 1.0kb upstream 1.0kb upstream 1000 false scaffold_7: 23489013-23490012 Setaria italica
Seita.7G146700 1.0kb downstream 1.0kb downstream 7588 true scaffold_7: 23490013-23497600 Setaria italica
Seita.7G146700 1.0kb downstream 1.0kb downstream 1000 false scaffold_7: 23496601-23497600 Setaria italica
Seita.7G146700 2.0kb upstream 2.0kb upstream 8588 true scaffold_7: 23488013-23496600 Setaria italica
Seita.7G146700 2.0kb upstream 2.0kb upstream 2000 false scaffold_7: 23488013-23490012 Setaria italica
Seita.7G146700 2.0kb downstream 2.0kb downstream 8588 true scaffold_7: 23490013-23498600 Setaria italica
Seita.7G146700 2.0kb downstream 2.0kb downstream 2000 false scaffold_7: 23496601-23498600 Setaria italica
Seita.7G146700 5.0kb upstream 5.0kb upstream 11588 true scaffold_7: 23485013-23496600 Setaria italica
Seita.7G146700 5.0kb upstream 5.0kb upstream 5000 false scaffold_7: 23485013-23490012 Setaria italica
Seita.7G146700 5.0kb downstream 5.0kb downstream 11588 true scaffold_7: 23490013-23501600 Setaria italica
Seita.7G146700 5.0kb downstream 5.0kb downstream 5000 false scaffold_7: 23496601-23501600 Setaria italica
Seita.7G146700 10.0kb upstream 10.0kb upstream 16588 true scaffold_7: 23480013-23496600 Setaria italica
Seita.7G146700 10.0kb upstream 10.0kb upstream 10000 false scaffold_7: 23480013-23490012 Setaria italica
Seita.7G146700 10.0kb downstream 10.0kb downstream 16588 true scaffold_7: 23490013-23506600 Setaria italica
Seita.7G146700 10.0kb downstream 10.0kb downstream 10000 false scaffold_7: 23496601-23506600 Setaria italica

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122197063 5267 Panicoideae View MSA
124570725 5269 Grass View MSA
122047224 5273 Angiosperm View MSA
121350831 5274 Embryophyte View MSA
123381898 5275 Viridiplantae View MSA

20 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.103       High
cufflinks 2.352        
cufflinks 0.68       Low
cufflinks 0.496       Low
cufflinks 0.657       Low
cufflinks 2.439        
cufflinks 1.97        
cufflinks 2.488        
cufflinks 1.057        
cufflinks 3.302       High
cufflinks 2.244        
cufflinks 1.686        
cufflinks 1.111        
cufflinks 0.778       Low
cufflinks 2.093        
cufflinks 2.353        
cufflinks 2.355        
cufflinks 3.255       High
cufflinks 1.34        
cufflinks 2.48        

0 Strain