Gene : Seita.7G229800 S. italica v2.2
Defline:  (1 of 11) PF04755 - PAP_fibrillin (PAP_fibrillin) Genomic Order:  2298
Name:  ? Seita.7G229800 Secondary Identifier:  ? PAC:32704887
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Seita.7G229800 0.5kb upstream 0.5kb upstream 2081 true scaffold_7: 29348885-29350965 Setaria italica
Seita.7G229800 0.5kb upstream 0.5kb upstream 500 false scaffold_7: 29350466-29350965 Setaria italica
Seita.7G229800 0.5kb downstream 0.5kb downstream 2081 true scaffold_7: 29348385-29350465 Setaria italica
Seita.7G229800 0.5kb downstream 0.5kb downstream 500 false scaffold_7: 29348385-29348884 Setaria italica
Seita.7G229800 1.0kb upstream 1.0kb upstream 2581 true scaffold_7: 29348885-29351465 Setaria italica
Seita.7G229800 1.0kb upstream 1.0kb upstream 1000 false scaffold_7: 29350466-29351465 Setaria italica
Seita.7G229800 1.0kb downstream 1.0kb downstream 2581 true scaffold_7: 29347885-29350465 Setaria italica
Seita.7G229800 1.0kb downstream 1.0kb downstream 1000 false scaffold_7: 29347885-29348884 Setaria italica
Seita.7G229800 2.0kb upstream 2.0kb upstream 3581 true scaffold_7: 29348885-29352465 Setaria italica
Seita.7G229800 2.0kb upstream 2.0kb upstream 2000 false scaffold_7: 29350466-29352465 Setaria italica
Seita.7G229800 2.0kb downstream 2.0kb downstream 3581 true scaffold_7: 29346885-29350465 Setaria italica
Seita.7G229800 2.0kb downstream 2.0kb downstream 2000 false scaffold_7: 29346885-29348884 Setaria italica
Seita.7G229800 5.0kb upstream 5.0kb upstream 6581 true scaffold_7: 29348885-29355465 Setaria italica
Seita.7G229800 5.0kb upstream 5.0kb upstream 5000 false scaffold_7: 29350466-29355465 Setaria italica
Seita.7G229800 5.0kb downstream 5.0kb downstream 6581 true scaffold_7: 29343885-29350465 Setaria italica
Seita.7G229800 5.0kb downstream 5.0kb downstream 5000 false scaffold_7: 29343885-29348884 Setaria italica
Seita.7G229800 10.0kb upstream 10.0kb upstream 11581 true scaffold_7: 29348885-29360465 Setaria italica
Seita.7G229800 10.0kb upstream 10.0kb upstream 10000 false scaffold_7: 29350466-29360465 Setaria italica
Seita.7G229800 10.0kb downstream 10.0kb downstream 11581 true scaffold_7: 29338885-29350465 Setaria italica
Seita.7G229800 10.0kb downstream 10.0kb downstream 10000 false scaffold_7: 29338885-29348884 Setaria italica

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122175255 5267 Panicoideae View MSA
124570196 5269 Grass View MSA
122042948 5273 Angiosperm View MSA
121347076 5274 Embryophyte View MSA
123428085 5275 Viridiplantae View MSA

20 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.694        
cufflinks 15.428     High  
cufflinks 60.14     High  
cufflinks 52.669     High  
cufflinks 63.723     High High
cufflinks 11.903        
cufflinks 37.964     High  
cufflinks 67.522     High High
cufflinks 38.401     High  
cufflinks 3.999       Low
cufflinks 5.077        
cufflinks 2.533       Low
cufflinks 4.858        
cufflinks 60.413     High  
cufflinks 3.806       Low
cufflinks 65.031     High High
cufflinks 4.669        
cufflinks 3.839       Low
cufflinks 164.966     High High
cufflinks 4.617        

0 Strain