Gene : Seita.7G241200 S. italica v2.2
Defline:  (1 of 21) PF03763 - Remorin, C-terminal region (Remorin_C) Genomic Order:  2412
Name:  ? Seita.7G241200 Secondary Identifier:  ? PAC:32703117
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Seita.7G241200 0.5kb upstream 0.5kb upstream 4100 true scaffold_7: 30264614-30268713 Setaria italica
Seita.7G241200 0.5kb upstream 0.5kb upstream 500 false scaffold_7: 30264614-30265113 Setaria italica
Seita.7G241200 0.5kb downstream 0.5kb downstream 4100 true scaffold_7: 30265114-30269213 Setaria italica
Seita.7G241200 0.5kb downstream 0.5kb downstream 500 false scaffold_7: 30268714-30269213 Setaria italica
Seita.7G241200 1.0kb upstream 1.0kb upstream 4600 true scaffold_7: 30264114-30268713 Setaria italica
Seita.7G241200 1.0kb upstream 1.0kb upstream 1000 false scaffold_7: 30264114-30265113 Setaria italica
Seita.7G241200 1.0kb downstream 1.0kb downstream 4600 true scaffold_7: 30265114-30269713 Setaria italica
Seita.7G241200 1.0kb downstream 1.0kb downstream 1000 false scaffold_7: 30268714-30269713 Setaria italica
Seita.7G241200 2.0kb upstream 2.0kb upstream 5600 true scaffold_7: 30263114-30268713 Setaria italica
Seita.7G241200 2.0kb upstream 2.0kb upstream 2000 false scaffold_7: 30263114-30265113 Setaria italica
Seita.7G241200 2.0kb downstream 2.0kb downstream 5600 true scaffold_7: 30265114-30270713 Setaria italica
Seita.7G241200 2.0kb downstream 2.0kb downstream 2000 false scaffold_7: 30268714-30270713 Setaria italica
Seita.7G241200 5.0kb upstream 5.0kb upstream 8600 true scaffold_7: 30260114-30268713 Setaria italica
Seita.7G241200 5.0kb upstream 5.0kb upstream 5000 false scaffold_7: 30260114-30265113 Setaria italica
Seita.7G241200 5.0kb downstream 5.0kb downstream 8600 true scaffold_7: 30265114-30273713 Setaria italica
Seita.7G241200 5.0kb downstream 5.0kb downstream 5000 false scaffold_7: 30268714-30273713 Setaria italica
Seita.7G241200 10.0kb upstream 10.0kb upstream 13600 true scaffold_7: 30255114-30268713 Setaria italica
Seita.7G241200 10.0kb upstream 10.0kb upstream 10000 false scaffold_7: 30255114-30265113 Setaria italica
Seita.7G241200 10.0kb downstream 10.0kb downstream 13600 true scaffold_7: 30265114-30278713 Setaria italica
Seita.7G241200 10.0kb downstream 10.0kb downstream 10000 false scaffold_7: 30268714-30278713 Setaria italica

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122178581 5267 Panicoideae View MSA
124574852 5269 Grass View MSA
122049282 5273 Angiosperm View MSA
121351512 5274 Embryophyte View MSA
123382200 5275 Viridiplantae View MSA

20 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.282        
cufflinks 11.251       High
cufflinks 0.016     Low Low
cufflinks 0.011     Low Low
cufflinks 0.018     Low Low
cufflinks 11.015       High
cufflinks 1.572        
cufflinks 1.264        
cufflinks 0.678        
cufflinks 0.888        
cufflinks 1.489        
cufflinks 1.131        
cufflinks 0.301        
cufflinks 0.007     Low Low
cufflinks 1.686        
cufflinks 0.51        
cufflinks 1.51        
cufflinks 0.16        
cufflinks 0.011     Low Low
cufflinks 1.648        

0 Strain