Gene : Seita.7G246400 S. italica v2.2
Defline:  (1 of 17) PTHR23155//PTHR23155:SF586 - LEUCINE-RICH REPEAT-CONTAINING PROTEIN Genomic Order:  2464
Name:  ? Seita.7G246400 Secondary Identifier:  ? PAC:32704662
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Seita.7G246400 0.5kb upstream 0.5kb upstream 1386 true scaffold_7: 30550892-30552277 Setaria italica
Seita.7G246400 0.5kb upstream 0.5kb upstream 500 false scaffold_7: 30550892-30551391 Setaria italica
Seita.7G246400 0.5kb downstream 0.5kb downstream 1386 true scaffold_7: 30551392-30552777 Setaria italica
Seita.7G246400 0.5kb downstream 0.5kb downstream 500 false scaffold_7: 30552278-30552777 Setaria italica
Seita.7G246400 1.0kb upstream 1.0kb upstream 1886 true scaffold_7: 30550392-30552277 Setaria italica
Seita.7G246400 1.0kb upstream 1.0kb upstream 1000 false scaffold_7: 30550392-30551391 Setaria italica
Seita.7G246400 1.0kb downstream 1.0kb downstream 1886 true scaffold_7: 30551392-30553277 Setaria italica
Seita.7G246400 1.0kb downstream 1.0kb downstream 1000 false scaffold_7: 30552278-30553277 Setaria italica
Seita.7G246400 2.0kb upstream 2.0kb upstream 2886 true scaffold_7: 30549392-30552277 Setaria italica
Seita.7G246400 2.0kb upstream 2.0kb upstream 2000 false scaffold_7: 30549392-30551391 Setaria italica
Seita.7G246400 2.0kb downstream 2.0kb downstream 2886 true scaffold_7: 30551392-30554277 Setaria italica
Seita.7G246400 2.0kb downstream 2.0kb downstream 2000 false scaffold_7: 30552278-30554277 Setaria italica
Seita.7G246400 5.0kb upstream 5.0kb upstream 5886 true scaffold_7: 30546392-30552277 Setaria italica
Seita.7G246400 5.0kb upstream 5.0kb upstream 5000 false scaffold_7: 30546392-30551391 Setaria italica
Seita.7G246400 5.0kb downstream 5.0kb downstream 5886 true scaffold_7: 30551392-30557277 Setaria italica
Seita.7G246400 5.0kb downstream 5.0kb downstream 5000 false scaffold_7: 30552278-30557277 Setaria italica
Seita.7G246400 10.0kb upstream 10.0kb upstream 10886 true scaffold_7: 30541392-30552277 Setaria italica
Seita.7G246400 10.0kb upstream 10.0kb upstream 10000 false scaffold_7: 30541392-30551391 Setaria italica
Seita.7G246400 10.0kb downstream 10.0kb downstream 10886 true scaffold_7: 30551392-30562277 Setaria italica
Seita.7G246400 10.0kb downstream 10.0kb downstream 10000 false scaffold_7: 30552278-30562277 Setaria italica

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121844164 5273 Angiosperm View MSA
122117925 5267 Panicoideae View MSA
124411860 5269 Grass View MSA
121114891 5274 Embryophyte View MSA
123154078 5275 Viridiplantae View MSA

20 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.132        
cufflinks 3.963       High
cufflinks 1.303        
cufflinks 0.887        
cufflinks 1.477        
cufflinks 3.606       High
cufflinks 3.564       High
cufflinks 0.686        
cufflinks 2.547        
cufflinks 0.803        
cufflinks 2.223        
cufflinks 0.466       Low
cufflinks 1.061        
cufflinks 1.194        
cufflinks 0.883        
cufflinks 2.475        
cufflinks 0.388       Low
cufflinks 1.0        
cufflinks 0.995        
cufflinks 0.602       Low

0 Strain