Gene : Seita.7G249200 S. italica v2.2
Defline:  (1 of 9) 1.3.1.77 - Anthocyanidin reductase / ANR Genomic Order:  2492
Name:  ? Seita.7G249200 Secondary Identifier:  ? PAC:32704291
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Sitalica PWY-6035 Setaria italica pathologic  
Sitalica PWY-641 Setaria italica pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Seita.7G249200 0.5kb upstream 0.5kb upstream 3034 true scaffold_7: 30689587-30692620 Setaria italica
Seita.7G249200 0.5kb upstream 0.5kb upstream 500 false scaffold_7: 30689587-30690086 Setaria italica
Seita.7G249200 0.5kb downstream 0.5kb downstream 3034 true scaffold_7: 30690087-30693120 Setaria italica
Seita.7G249200 0.5kb downstream 0.5kb downstream 500 false scaffold_7: 30692621-30693120 Setaria italica
Seita.7G249200 1.0kb upstream 1.0kb upstream 3534 true scaffold_7: 30689087-30692620 Setaria italica
Seita.7G249200 1.0kb upstream 1.0kb upstream 1000 false scaffold_7: 30689087-30690086 Setaria italica
Seita.7G249200 1.0kb downstream 1.0kb downstream 3534 true scaffold_7: 30690087-30693620 Setaria italica
Seita.7G249200 1.0kb downstream 1.0kb downstream 1000 false scaffold_7: 30692621-30693620 Setaria italica
Seita.7G249200 2.0kb upstream 2.0kb upstream 4534 true scaffold_7: 30688087-30692620 Setaria italica
Seita.7G249200 2.0kb upstream 2.0kb upstream 2000 false scaffold_7: 30688087-30690086 Setaria italica
Seita.7G249200 2.0kb downstream 2.0kb downstream 4534 true scaffold_7: 30690087-30694620 Setaria italica
Seita.7G249200 2.0kb downstream 2.0kb downstream 2000 false scaffold_7: 30692621-30694620 Setaria italica
Seita.7G249200 5.0kb upstream 5.0kb upstream 7534 true scaffold_7: 30685087-30692620 Setaria italica
Seita.7G249200 5.0kb upstream 5.0kb upstream 5000 false scaffold_7: 30685087-30690086 Setaria italica
Seita.7G249200 5.0kb downstream 5.0kb downstream 7534 true scaffold_7: 30690087-30697620 Setaria italica
Seita.7G249200 5.0kb downstream 5.0kb downstream 5000 false scaffold_7: 30692621-30697620 Setaria italica
Seita.7G249200 10.0kb upstream 10.0kb upstream 12534 true scaffold_7: 30680087-30692620 Setaria italica
Seita.7G249200 10.0kb upstream 10.0kb upstream 10000 false scaffold_7: 30680087-30690086 Setaria italica
Seita.7G249200 10.0kb downstream 10.0kb downstream 12534 true scaffold_7: 30690087-30702620 Setaria italica
Seita.7G249200 10.0kb downstream 10.0kb downstream 10000 false scaffold_7: 30692621-30702620 Setaria italica

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122196829 5267 Panicoideae View MSA
124589961 5269 Grass View MSA
122043153 5273 Angiosperm View MSA
121310082 5274 Embryophyte View MSA
123428289 5275 Viridiplantae View MSA

20 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.927        
cufflinks 13.898     High High
cufflinks 0.165       Low
cufflinks 0.439        
cufflinks 1.57        
cufflinks 16.76     High High
cufflinks 2.231        
cufflinks 1.904        
cufflinks 2.228        
cufflinks 1.309        
cufflinks 1.538        
cufflinks 0.623        
cufflinks 5.855       High
cufflinks 0.259       Low
cufflinks 3.985        
cufflinks 0.295       Low
cufflinks 1.215        
cufflinks 0.124       Low
cufflinks 0.295       Low
cufflinks 3.966        

0 Strain